Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01245 ATGGAAGAGAGCACCCAAAGAAAGTTCTCTACCCTGATCCATGAACTTATCCAAGGAAAGGAGCTAGCAAAGCAGCTCGGTAACCATCTGGCTTCTTCTTCTCCATCACCCCATGAAACCAATGAATTGTTGGTTGATAAAATTCTCTCATCCTATGAGAAAGCACTCACCATGCTGAACCGAGGGTTTATTGTGGGAGAGGCCAAACCCACCAGTGGCATCATGATGGATTCCCATTGTTCTTTTACAAATGGTGCAAGTCCCAAAAGTGAGGTCGCGGACCGTGAATTTGAGCACAAAGCTGTCTTCAAGAAAAGAACGACCATGCCTAGATGGACGGAGCAAGTGAAGATTTGCTCAAGAACAGGGCTCGAAGGGTCTTTGGATGATGGATATAGCTGGAGAAAATACGGGCAGAAGGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGTACACATAGAAATGTTCAAGGGTGCCTGGCAACAAAACAAGTTCAAAGGTCAGATGAAGATCCAACAACAATTGAGGTGACCTACAGAGGAAGACATACGTGCACGCAAGCAAAGTATTTGAACAAGTCATTCCCCTCAAACATAAAGATGGGTTTGGGGGAAAATCAATTCCACAATGATCAAAATAATCAACCACTTCACGAGAAAATACAACAAACCCCATCGGGGATTTTTGCCTTTGAAACAGAGCATATAGTCAAAACTGAGGAATTGGAAATCAAGGAGGATATCTTTACATGGTTCTCATTTCCTTCTCAATCAAATGGATCAGAAAACGAGGGCAACATGTTACCCGAGTCGACGTTTGAAAACCATTTCACGGAAAGCTTTTCTCCTGTATTCATATCACCAGCGACTTCAGAATCAAACCCTTTGTGTTTGTCAGCATGCCACTTGGACAGCACTGAACTGTTATGCCAACATATCCAAACCTCGGACAACACTGATATCACTGAGACAGTTTCAGCCCCAACTTCAGTAACCAACTCCCCAATTCTGGATTTGGACATTTGTTTTCATAAAGGGGATTTTGACACAGATTTCCCTTTCAACACCCCTGATTTTTTCTCTTTATTCGAACTTCCCTGCACTTCCACTTAG 1122 0.4278 MEESTQRKFSTLIHELIQGKELAKQLGNHLASSSPSPHETNELLVDKILSSYEKALTMLNRGFIVGEAKPTSGIMMDSHCSFTNGASPKSEVADREFEHKAVFKKRTTMPRWTEQVKICSRTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTTIEVTYRGRHTCTQAKYLNKSFPSNIKMGLGENQFHNDQNNQPLHEKIQQTPSGIFAFETEHIVKTEELEIKEDIFTWFSFPSQSNGSENEGNMLPESTFENHFTESFSPVFISPATSESNPLCLSACHLDSTELLCQHIQTSDNTDITETVSAPTSVTNSPILDLDICFHKGDFDTDFPFNTPDFFSLFELPCTST 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01245 373 Gene3D WRKY domain 115 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco11g01245 373 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 314 IPR044810 GO:0003700
Phco11g01245 373 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco11g01245 373 FunFam WRKY transcription factor 53 114 191 - -
Phco11g01245 373 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco11g01245 373 ProSiteProfiles WRKY domain profile. 123 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco11g01245 373 SUPERFAMILY WRKY DNA-binding domain 127 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01245 Phco-Chr11 9327759 9329230 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco11g01245 WRKY 5.6e-27 CL0274