Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01212 ATGGAAGAAATAGGTCCCAATTCATGCGCACAGCCATCATTAGAGAAGAAAGCAAGACCACAAGAGCAGTTGAATTGTCCAAGGTGCAGTTCAACCAACACAAAGTTCTGTTATTACAACAATTACAGCCTCACACAACCAAGATACTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGTGGTTCTCTCAGAAACGTCCCCGTTGGAGGTGGCTCCAGGAAGAACAAGAAGGCCACATCATCAAAGGTTCCTGACTTGAATCCACCAAGCCTCTCCTCAGTCTCGGCTATTTCTTCCCAAAACCCTAAAATGCAAGGAGTCCATGACCTTAATTTGGCTTTTCCTGCAGCTATGGACAAGTATCATGGCATGTCTCCATATGTTGAGATGCCAAAACTTGAAATTGGTGGTGACAATACCGGTCACCACCATAGCCCTTCTTCTCTTTCACCACCGTATGGCATGGTGTCCAGGGGTTTGAATCCTTATGCTCCTAATCCCTTCATGACAAGCTCAGATTCACTTTACACACCGAACTATCCCATGCAAGAAATTAAACCAAACCTTAGCTTTTCAGTTGATGGGTTTGGAAACAGATCACACGGGGTTCAAGAGAACGGTGGTGGCGGGAGGCTTTTGTTCCCTTTCGGAGACATCAAGCACCTTTCTGCAGGTGTTGAAGTGGAACACAATAAAGAACAAGGAAATAATCCAACTGGATACTGGACTGGAATCATCGGTGAAGGGTCATCATGGTAA 762 0.4514 MEEIGPNSCAQPSLEKKARPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKATSSKVPDLNPPSLSSVSAISSQNPKMQGVHDLNLAFPAAMDKYHGMSPYVEMPKLEIGGDNTGHHHSPSSLSPPYGMVSRGLNPYAPNPFMTSSDSLYTPNYPMQEIKPNLSFSVDGFGNRSHGVQENGGGGRLLFPFGDIKHLSAGVEVEHNKEQGNNPTGYWTGIIGEGSSW 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01212 253 MobiDBLite consensus disorder prediction 1 21 - -
Phco11g01212 253 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Phco11g01212 253 MobiDBLite consensus disorder prediction 232 253 - -
Phco11g01212 253 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Phco11g01212 253 MobiDBLite consensus disorder prediction 75 98 - -
Phco11g01212 253 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 138 IPR045174 GO:0003700|GO:0006355
Phco11g01212 253 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Phco11g01212 253 MobiDBLite consensus disorder prediction 65 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01212 Phco-Chr11 9056376 9057137 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco11g01212 zf-Dof 3.9e-33 No_clan