Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01186 ATGGAAGACTTGTACCGTGTTAGTTTCAGTACAGTGGATGAAAATTCTAGTTCATCCAATGATATTTTCTGGGGCACTGAGGAACTGAATGAAGTATACAAGGTACAATTTTCTGGAGCAGAAGATCATAGAGTTTATGGGGGAGTAGACCCATTTTACTCTAATTTTGAGTTTTCCCCAGATTACTCATCACAAGATGGAAACCTTTTATCTACTAATCAAGAAAAGTACCACCAGCAACAATCATACCATGATTACGGGCATTTGGATGACATCCTTCAGTTTGACATGGTCTCTCCACCACTCCAATTTGATGGACAGTATCCAACCACGGTTCCATTGTGTGGCACAACAAAGGATGAGCCACACTCAACTATCCCTTTAGCCTCACTTGAGATCTTGAAGAACTATGGCAAGGGCTTCAAGAGGTTGTCCAATGAAGGCAAATCCCTACAGCCAGTAGTTGATTCTGTGGCCACAAATGAATTTGTTTTGAGAAAGCTCTCAACTGAAGATGTCATGAGGATAGCAGGAACAAGGTTCATTCAATCATCATCTTCAGAGTCAGAACCTTTGCCTTTCTTGGAACCTCACCCTTATGGTTTTTCCTTCTCTGGACTCTCTGATGAGGAGAAAGAGGATGTGGCACTAGCTGAGTCCCTCTTGGCTTCTGCTGAGAAAGTGGGTCATCAACAATTTGAACGTGCAAGCAAGTTGCTAAGTCATTGTGAATCATTGTCAAGCAAAACTGGGAGCCCCGTTAAGCGAATTGTTCATTATTTTGTTGAAGCACTTCTCCAAAGGATAGATAGAGAAACAGGAAGAGGTTCATCCAAGGATTTGCAAAAGGATCAGTCATTTGATCCTGAAGAGGCAGCCAAGGAACTAAACCCCACTATTGTTGCATTTTGTAAAGAGCTTCCCTTTTGTCAAATTTCAGTGTTCACTGCAGTTCAAGCTATAATAGAAGATGTGGCTGAAGCAAAGAAGATTCATGTTATTGATCTTGAAATCAGAAAGGGGGGCCAATGGGCTATCCTAATGCAAGCCCTTGAGTCAAGACACCAATGTCCAATTGAGCTTCTAAAGATTACCGCTATTGAAAGTGGAACCACTAGACATGTAGTAGAGGACACTGGTAAGAGATTGAAGGATTTTGCTCAAGGTCTGAACATTCCCTTCTCTTTCAACATCGTTATGGTACCAGACCTATTACATCTCAGAGAAGATCTTTTTGAGATTGATCCTGAGGAAGCAATTGCTGTTTATTCACAATATGCTCTTAGAACCAAGATTCAACAATCAGACCATCTTGAAGCCATCATGAGAGTAATTAGAACCTTGAATCCTAATGTGATGGTGGTAGCTGAAATTGAGGCAAATCACAACTCCACATCTTTTATAAACCGTTTCATTGAGGCTCTTTTCTTCTTCAGTGCATTCTTTGATTGTCTTGAGGTTTGCATGAAGGGGGATGAGAAGAACCGAATGATTATTGAATCATTATACTTCAGTCATGGAATCAGGAACATTGTGGCCACAGAAGGAGCAGAAAGAAAGACTAGGAATGTGAAGATCGATGTGTGGAGGGCCTTCTTCTCCCGCTTTGGAATGGTGGAGAAAGAACTGAGCACTTTGTCTTTATACCAAGCAGATTTAGTGAGTAAAAGATTTCCTTGTGGAAGTTTTTGCACGTTTGATAAGAATGGGCAGTGCCTCCTTGTTGGATGGAAAGGAACACCAATTAATTCTGTTTCTGTCTGGAAATTCCTTTGA 1776 0.4105 MEDLYRVSFSTVDENSSSSNDIFWGTEELNEVYKVQFSGAEDHRVYGGVDPFYSNFEFSPDYSSQDGNLLSTNQEKYHQQQSYHDYGHLDDILQFDMVSPPLQFDGQYPTTVPLCGTTKDEPHSTIPLASLEILKNYGKGFKRLSNEGKSLQPVVDSVATNEFVLRKLSTEDVMRIAGTRFIQSSSSESEPLPFLEPHPYGFSFSGLSDEEKEDVALAESLLASAEKVGHQQFERASKLLSHCESLSSKTGSPVKRIVHYFVEALLQRIDRETGRGSSKDLQKDQSFDPEEAAKELNPTIVAFCKELPFCQISVFTAVQAIIEDVAEAKKIHVIDLEIRKGGQWAILMQALESRHQCPIELLKITAIESGTTRHVVEDTGKRLKDFAQGLNIPFSFNIVMVPDLLHLREDLFEIDPEEAIAVYSQYALRTKIQQSDHLEAIMRVIRTLNPNVMVVAEIEANHNSTSFINRFIEALFFFSAFFDCLEVCMKGDEKNRMIIESLYFSHGIRNIVATEGAERKTRNVKIDVWRAFFSRFGMVEKELSTLSLYQADLVSKRFPCGSFCTFDKNGQCLLVGWKGTPINSVSVWKFL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01186 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 189 579 IPR005202 -
Phco11g01186 591 ProSiteProfiles GRAS family profile. 208 589 IPR005202 -
Phco11g01186 591 Pfam GRAS domain family 218 589 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01186 Phco-Chr11 8881528 8883303 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco11g01186 GRAS 2.4e-90 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01186 11 8881528 8883303 Phco11g01186 11 8881528 8883303 ECH