Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01180 ATGATTTCCATTCCCACTTCCTCACTTGCTCCATTTAGCCAAAGAGAAGAAATGGTTGACCGTACAAGGAGCAAGATTCTTATAAGAGAATATAATGAAGATAAAGATGTTAAAATGGTGAGAAAACTAGAGAGGAACTCTGAGATTGGGACTAAAAAGGTGGTCTCCATTTTTACCAACATGATGGGTGATCCTTTATCTAGGATTAGGTTTTTCCCCCTTCATGTAATGCTGGTAGCTGAGCTTCTCGAGAGCAGGGAACTTGTTGGAGTGATTAGGGGAGTTATTAAGAATGTAGGTACTCTTTCTGGATCACTCTTGAAGATGGGTTACATCCTTGGCCTCAGAGTCTCTCCTACTTACAGGAGAAAGGGGGTTGCACTTAGACTTATCGCTGCAGTTGAAGAATGGATGGTGAGAAATGGAGCTGAGTATGCATTCCTTGCCACTGAAAAGGATAATGATGCTTCTAAAAACCTATTCACAATCAAATGCAATTATGTGAACCTTAGCTCACTTGTCATATTTGTCCAACCAATTAGTTCCCTCACAAAGCACATTTCCAGGGATATAAAAATAGAGAAAGTGGATATAGATCTAGCAATTTCGTTATACAGAAGAACCTTGAGAACCAAAGATTTGTATCCACTAGATATGGACGTTATTCTGAAGGAGAAACTCAGTGTAGGCACATGGGTAAGTTATTATAACAGGGAGGGTCTCAATTTGCGAAGCAAGGTAAACAATGAAGAAGATCTCATTAGCAATGAAACTTCAAACTCATGGGTCATTTTTAGTATATGGAACACTTGTGAAGCTTACAAGCTTCAAGTTAGAAGGTCTCAACAAGTAAGGTTTCTTCTTACAACCTTAAATCACGCAAGAGAGAGACTTTTCCCTTGTCTCAAAATGTCGATGAGTAACTCACTTTGTAGATCCTTTGGGTTTCTCTTTCTTTATGGAATCTATGGACAGGGAGAGAACCTTGGAGAGCTCATGGAATCCATGTGGAGATTCACATCAAGAGTGGGAGAAGGAATGGGGAACTGTAAGGTGTTTATAACTGAGTTAGGGTTTGGCGATCCACTTGCCAACCATGTTCCTCAAACAGATTCCATCTCATGTATCGATGATCTATGGTATACAAAGAGACTTTCAAGCCATGTTGATGTAAACATTGATGAAATATTGATGAGACAAGTGGGAAATGTGTTTGTTGACCCTAGAGATTTTTAG 1236 0.394 MISIPTSSLAPFSQREEMVDRTRSKILIREYNEDKDVKMVRKLERNSEIGTKKVVSIFTNMMGDPLSRIRFFPLHVMLVAELLESRELVGVIRGVIKNVGTLSGSLLKMGYILGLRVSPTYRRKGVALRLIAAVEEWMVRNGAEYAFLATEKDNDASKNLFTIKCNYVNLSSLVIFVQPISSLTKHISRDIKIEKVDIDLAISLYRRTLRTKDLYPLDMDVILKEKLSVGTWVSYYNREGLNLRSKVNNEEDLISNETSNSWVIFSIWNTCEAYKLQVRRSQQVRFLLTTLNHARERLFPCLKMSMSNSLCRSFGFLFLYGIYGQGENLGELMESMWRFTSRVGEGMGNCKVFITELGFGDPLANHVPQTDSISCIDDLWYTKRLSSHVDVNIDEILMRQVGNVFVDPRDF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01180 411 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 23 411 - -
Phco11g01180 411 Pfam Acetyltransferase (GNAT) family 78 166 IPR000182 GO:0016747
Phco11g01180 411 CDD NAT_SF 77 148 - -
Phco11g01180 411 Gene3D - 28 180 - -
Phco11g01180 411 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 26 228 IPR000182 GO:0016747
Phco11g01180 411 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 20 161 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01180 Phco-Chr11 8832213 8834044 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco11g01180 Acetyltransf_1 4.2e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01180 11 8832213 8834044 Phco11g01180 11 8832213 8834044 ECH
Phco8g02149 8 23043124 23044704 Phco11g01180 11 8832213 8834044 PCT