Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01057 ATGGTGAGTATCCTTGGGGAGGGACTCTATTTTGTTCTGATTCTTGTGGCAGTGTCTGTGACAGTGAGCACCGTGGATGCTCAAACAAAGACTATTCTCTTAAATTGTGGTTCAAACTCTTCTTTGAATGTGGATGGTAGAAGATGGGTGGGGGATTTGGCCACCGATAACAATGTCACCCTGAGCACCCCCAGTGTTGTTGCTAACACTTCTACATTAAGTGGCAGTTCAGTTTATGATCCTCTCTATAAAACAGCCAGAATTTTCACTGTTCCTTTGAATTACACAATCAAAGATGTTCATGGAAACTACTTTGTTAGGTTCCATTTTTGCCCCTTTGTGATTGACGACTTCAATGTGAACGAGTCCTCATTTGGTGTTGTGGTCAATGGTCTGAAACTGTTATCAGAGTTTGATGTTCCTGGTAAGATATCCCACAAGAATATGAACTTGCTGAATTCTGGAAGAAATGCTAGTTCATTCTTCTTGGTCAAAGAATATATTCTGGCTGTGAATGGGGATATTCTTGTGATTGAGTTTGTTCCAAGCACAAGCTCCTTTGGCTTCATCAATGCCATTGAGATTGTCCCAGTTGTGGGAGAGCTTTTTGCTGGCTCAGTTAGTAGAGTTGGTGGAAGTGGTGGAAACTTGAACTTGCCCGAACATGGGATGGAGACCATGTATAGGCTGAATGTCGGTGGTCCTGAGGTTCAGTCCAATCAGGATCGTGATCTTTGGAGAACTTGGGAAGTGGATTCTGGATATATGATCATTGAAAATGCTGGGTCTGGAATTAAGAACAGTTCTAACATTACATATTCTTCCGTGAATGATACTTCGGTGGCTCCTCTCCTTGTGTATGAAACTGCGAGGGCAATGTCCAACTCTGAAGTCTTGGACAAAAGGTTCAATATGTCATGGAAATTTGAAGTAGATCCTGACTTTGATTATTTGATCCGTTTGCATTTTTGTGAGCTGGTTTATGACAGGGCAAATGAGAGAATATTTAGGATCTACATAAACAATAGGACAGCTGCGGATAACGTTGATGTGTTTGTGCGAGCTGGAGGGATGAATAAAGCATATCACTTGGACTATTCTGATCCCGTGTCATCAAAGATTGACACGGTTTGGGTTCAACTCGGTCCTGACACAGCAGCTGGTGCTGCAGGAACTGATGCTCTCTTGAATGGTCTGGAGGTTTTCAAGCTTAGTCGAAATGGAAATCTTGCATATGTTGAGAGGTTTGACATAGGTGGCAATTCAGGAAGCAAATCAACAGCAAGATCTGTTTGGGTGGGAGTTGGAGCAGGTGTAGCTTCTTTAGCTATAGTTGCACTTATAGTTATTGTATTCTGTTTCTGTAAAAGAAGGAGGAATGAATCAAGTGATACCAAAAACAACCCTCAGGGTTGGAGGCCATTGTTCTTCTATGGAGGAGCTGCTGTTAACAACTCTGTGGGTGGCAAGGGATCAGCAGGAACCCAAAAGCTATACGGATCTGTGGCCTCAGTTAGAGTTGGCAAGAGGTTTACATTGGCAGAAATCAATGCTGCAACAAACAACTTTGATGACAGTTTGGTAATTGGAGTCGGAGGCTTTGGTAAGGTGTACAAAGGGGAGATTGAAGACGGTGTTCTGGCTGCAATTAAGCGCGCCAACCCCCAGTCTGAGCAAGGCCTGGCTGAATTTGAGACAGAAATTGAGATGCTGTCCAAACTCAGACACAGGCATCTGGTGTCCTTAATTGGTTTCTGTGAAGAGAAGAATGAAATGATCTTGGTTTATGAGTACATGGCCAATGGAACTCTCAGAAGCCACCTATTTGGGAGTGATCTCCCTCCCTTACCTTGGAAGCAGCGCCTAGAAGTGTGCATTGGTGCTGCAAGGGGACTGCACTACCTTCACACTGGTGCTGACCGCGGAATCATTCACAGGGATGTCAAAACAACCAATATTCTGCTAGATGAGAACTTTGTAGCCAAAATGTCTGATTTTGGATTGTCAAAAGATGGTCCAGCCTTTGAACACACCCATGTTAGCACAGCTGTGAAAGGAAGTTTTGGCTATCTAGACCCTGAGTACTTCAGAAGGCAGCAATTGACTGAGAAATCAGATGTATACTCCTTTGGAGTTGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTGATAAACCCCACCTTGCCTAGAGATCAGATCAATCTTGCAGAATGGGCAATGAGATGGCAAAGGCAAGGATCACTTGACACAATCATTGACCCTCGTCTTAGTGGAAACTATTGTCCCGAATCAGTGTCCAAGTTTGGAGAGATAGCAGAAAAATGTCTTGCTGATGATGGAAAGAGCCGTCCCACCATGGGGGAGGTGTTGTGGCATTTGGAGTATGTCTTGCAACTACATGAAGCTTGGCTCAACATGGACACCACAGAAACTTCTTTCTCTGGTAGTAGTCTTGCTTTGGGAGGTCCAAAAGATGGAGAATTTGAAATGGTACAAGAGTCGTCTTCAAGTCAAGATGAAGTTGGTTTTGACCTCAAACACACAGCTTAA 2550 0.4365 MVSILGEGLYFVLILVAVSVTVSTVDAQTKTILLNCGSNSSLNVDGRRWVGDLATDNNVTLSTPSVVANTSTLSGSSVYDPLYKTARIFTVPLNYTIKDVHGNYFVRFHFCPFVIDDFNVNESSFGVVVNGLKLLSEFDVPGKISHKNMNLLNSGRNASSFFLVKEYILAVNGDILVIEFVPSTSSFGFINAIEIVPVVGELFAGSVSRVGGSGGNLNLPEHGMETMYRLNVGGPEVQSNQDRDLWRTWEVDSGYMIIENAGSGIKNSSNITYSSVNDTSVAPLLVYETARAMSNSEVLDKRFNMSWKFEVDPDFDYLIRLHFCELVYDRANERIFRIYINNRTAADNVDVFVRAGGMNKAYHLDYSDPVSSKIDTVWVQLGPDTAAGAAGTDALLNGLEVFKLSRNGNLAYVERFDIGGNSGSKSTARSVWVGVGAGVASLAIVALIVIVFCFCKRRRNESSDTKNNPQGWRPLFFYGGAAVNNSVGGKGSAGTQKLYGSVASVRVGKRFTLAEINAATNNFDDSLVIGVGGFGKVYKGEIEDGVLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLPWKQRLEVCIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPRDQINLAEWAMRWQRQGSLDTIIDPRLSGNYCPESVSKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNMDTTETSFSGSSLALGGPKDGEFEMVQESSSSQDEVGFDLKHTA 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01057 849 SUPERFAMILY Protein kinase-like (PK-like) 501 795 IPR011009 -
Phco11g01057 849 Pfam Malectin-like domain 34 403 IPR024788 -
Phco11g01057 849 ProSiteProfiles Protein kinase domain profile. 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01057 849 PANTHER OS07G0166700 PROTEIN 509 800 IPR045272 GO:0004714|GO:0006468
Phco11g01057 849 Pfam Protein tyrosine and serine/threonine kinase 528 790 IPR001245 GO:0004672|GO:0006468
Phco11g01057 849 FunFam FERONIA receptor-like kinase 31 199 - -
Phco11g01057 849 Gene3D Transferase(Phosphotransferase) domain 1 599 813 - -
Phco11g01057 849 FunFam receptor-like protein kinase FERONIA 489 598 - -
Phco11g01057 849 FunFam Receptor-like protein kinase FERONIA 223 406 - -
Phco11g01057 849 Gene3D - 223 426 - -
Phco11g01057 849 Gene3D - 28 198 - -
Phco11g01057 849 CDD STKc_IRAK 529 794 - -
Phco11g01057 849 SMART serkin_6 523 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01057 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Phco11g01057 849 FunFam Receptor-like protein kinase FERONIA 599 812 - -
Phco11g01057 849 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Phco11g01057 849 Gene3D Phosphorylase Kinase; domain 1 492 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01057 Phco-Chr11 7841793 7844342 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco11g01057 Malectin_like 3.1e-29 CL0202