Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01021 ATGAAGGAAAGTGGAGGTAGAAAGCAGGGTGCAGCCTCACCCTGTGCTGCATGCAAGCTTCTGAGAAGAAGGTGTGCTCAGGATTGTGTTTTTGCTCCATATTTCCCTGCAGATGAACCTCAAAAGTTTGCAAATGTGCACAAGGTTTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGATCTACCAATGCATCAAAGAGGGGATGCAGTGAGTAGCATGGTGTATGAGGCGAATGCCAGAGTCCGAGACCCCGTTTATGGCTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGATGTGCTACAGACCCAATTGGCCCTGGCCCAGGCTGAGGTGGCCCACCTTAGAGTGAGACAAAATAGGTCTTTTTCAAGTTATGGGCCTAGGCCCAATAGCCCAACCAATAATGGGTTTCCATCACCCAAGACCTTGGACTCACATGCCAAGCCTATTTTTGACATGGAGATGGTGATGGACCAGGCCAGCTATGGGAGTTCAATGTGGTGA 513 0.4912 MKESGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRSFSSYGPRPNSPTNNGFPSPKTLDSHAKPIFDMEMVMDQASYGSSMW 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01021 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 127 - -
Phco11g01021 170 Coils Coil 93 120 - -
Phco11g01021 170 MobiDBLite consensus disorder prediction 123 144 - -
Phco11g01021 170 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Phco11g01021 170 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Phco11g01021 170 MobiDBLite consensus disorder prediction 123 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01021 Phco-Chr11 7562114 7565108 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco11g01021 LOB 1.7e-43 No_clan