Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00973 ATGTACCCGAGGCTAATACACCCCCATGACGGGATTGTGGCGCAGGATGACATGCAGGCTGCTGCTTCCAACCTCTCTCACTCTCACAAGGGAGACCCTTGTCTTGTTCTCACTGCTGATCCCAAACCTCGCCTTCGTTGGACTCAGGACTTGCACGAACGCTTCGTTGATGCCGTCACACAGCTTGGGGGAGCAAGTAAAGCTACACCAAAAGCAATAATGCGGACCATGAATGTCAAGGGCTTGACTCTGTTTCATTTGAAGAGTCATCTTCAGAAATACAGGCTTGGTAAGCAATCTGGGAAAGATTTGGGTGAAGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTGGCACTGAGAACACTTCTCCAAAGCTGCCAACTTCCGACACAAACGAGGGTTATGAAATCAAGGAGGCATTGAGAGCACAGATGGAAGTGCAGAGTAAATTACATTTGCAAGTGGAGGCAGAGAAGCATTTGCAGATTCGCCAGGATGCAGAGAGGAGATACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATTGGTGCTACAGTTATAGACACTGACAGCCAAAAGTTTCAAGCAATTGGAAGCAAGGCACCAAGAGGTACCTTGGTTGATCCTCTTGGATTTTACTCCTTGCCATCAGCTGAGGTGGCTGGAGTGAATGTTCCGGATGAAGAAATACCGCCTAGTATCCCACCCCAAAGGGCTGATTGTTCAACTGAAAGTTGTTTAACCTCACATGAAAGTTCTGGTGGATTGACTTTAGAAGGATCTCCAGGTGGGGGGAAAAGAAGGATGCTAGGCATGGACTCTATGGCAGCTCCCTTGATCTGGAGTGAAGCTAAGATGAGAACTCAGGCCATCAATGTGGCCCAAGGTAGTCATCCTCAAGGAATAACTAGGTATGGCATGTAG 942 0.4756 MYPRLIHPHDGIVAQDDMQAAASNLSHSHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDLGEGCKDGSYLLESPGTENTSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDSQKFQAIGSKAPRGTLVDPLGFYSLPSAEVAGVNVPDEEIPPSIPPQRADCSTESCLTSHESSGGLTLEGSPGGGKRRMLGMDSMAAPLIWSEAKMRTQAINVAQGSHPQGITRYGM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00973 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Phco11g00973 313 MobiDBLite consensus disorder prediction 108 132 - -
Phco11g00973 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Phco11g00973 313 MobiDBLite consensus disorder prediction 235 275 - -
Phco11g00973 313 MobiDBLite consensus disorder prediction 116 131 - -
Phco11g00973 313 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Phco11g00973 313 Gene3D - 41 99 - -
Phco11g00973 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 263 IPR044848 GO:0003700
Phco11g00973 313 MobiDBLite consensus disorder prediction 244 262 - -
Phco11g00973 313 FunFam Myb family transcription factor 41 99 - -
Phco11g00973 313 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Phco11g00973 313 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00973 Phco-Chr11 7160376 7165664 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco11g00973 Myb_DNA-binding 5.3e-06 CL0123