Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00940 ATGATTCTGAAATTGGTGATTCATTTCTTCATTTTGGTAATATGGGAGGTATCTGCACAAGATGACCTACCTGTAGCAAAGCTTGGCTGTAATTGGCAGTGTGGAGATGTTCCAATTCCCTTTCCGTTTGGAATGAAGAGTTCGGAGTGCTATGCAGGGAAATGGTTTGAAATAGAATGCAGAAACCCTTCCAGATATAACCATTACACTCACACACCTTACCTGAAGTGGATAGGACTGGAAGTGACATCCATTTATGTCGAAGAAGGTCTGGTTAATATCAACAATCCCATTTACCGTAGTAACTGCGGATCCAAAGATTCTTCGCAGGTCAACCAGTCGCTGGAAGGAAGCCCTTTCGTGTATTCCCAGAAACACAACAAATTTGTGGCCGCAGGTTGTAACAGTATTGCTGTTTTGAAGTTAAATGGGTCAGATGTTAGTGGTTGTGTGTCCATCTGCGACCAGAACTACAAGGTGGGTGATATCGGGAAAATTGAGCTTATAAACAGTGATTGCAATGGGAAATCCTGCTGTGAGAATTCCCTGCCACCGTATCTTAAAGAATACAGCACTGAAATAAAAGGTTTAAAGGAGAATGAAACGAGTGATGAGTGCAGTTATGCGATGGTTGTACAGCAATATCAGTACCACGGCTACCGACCCTTTTTTTATAATAATGGTCGCAAAAGGTACTACTTTCCTGTATATGGTTTGGTGAAGGATTTAGATGTGGTCCCTGCGGTGCTTGAATGGGAGATTCTGAACAATTTGAACCTTACACTCCCTCTAGATCATCACTCTGAGTGTTGTGACACTAATGTTACATCTTCACAGTATAAACGTTCAGGTCAGAGATGTTCCTGCAAATCCGGTTCCGGTAATCCCTACCTTGACGGAGGTTGTCCAGATGATCCTCCTCCTCCGCAGTACAGGAAATCGAGAAGTCCCTTAACAATATCCATCATAAAAGAAGTTTCTATAAGTTTCGGATCTATCATTTTACTCCTTATTTTATGGCGAGTGTTGACGGCTACAAAAAAAACTATTGTGGATAAATATAGAAAAAGAATGTTCAAAAGAAATGGAGGATTATTGTTACAACAAAGATTGTCTTCTGGTGAAGTTAATGTGGATAAAGTTAAAATTTTCAACTTAAAGGAGTTGGAGAAGGCCACTGATAACTTCAACACGAATAGAGTAGTTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATTAATGGAACAATTATTGCAGTGAAAAAATTTAAGGTCCAAGGAAAAATAGAAGAATTTATCAATGAATTTGTCATTCTATCACAAATTAACCACCGAAACGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTAAAATTCCTTTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTACTTGCATCAACAAAATGAGGATTTTCCAATGACATGGGACATTCGATTGAGAATTGCCACTGAAGTTGCTGGAGCTTTGTTTTACTTGCACTCTGCTGCTTCTCAGCCTATTTATCATAAAGATATCAAGTCAACAAATATACTTTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGTACATCTAGAATGATTTCCAGTGATGTTACTCACCTTACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATATTTTCAAACTAGTCAATTCACAGAAAAGAGTGATGTCTACAGCTTCGGAGTAGTTCTCGTTGAACTCTTAACAGGGAAAAGGCCAATAACTCTCACAAGTTCAGAGGAAGCCAAAAGTTTAGCTTCATATTTCATCCTCTGTGTGGAGCAAGATTGTGTATTTGATATTATTGATGAAAGAGTGACAAAGGAAGGGGAGAAAAATCATATCATGGAAGTTGTCAATCTTGCAAATAGATGTTTAGAGCTGAATGGAAAGAGACGACCAACTATGAAGGAAGTCACATTAGAATTAGAAAGTATTCGAAAATTGGAAGGAAAGTCAAATGCACAAGAAAAATATAATGAACTTGTTAGAAGTGAAGACTATCAATGTTGGGATGATTATTCTACTATCTTAGAAATAAGGTCAGCTTTTGATCTAAGTAGTAGAACACCAACCTTGGAAGATATTCATATTCGTACCATATAA 2169 0.3799 MILKLVIHFFILVIWEVSAQDDLPVAKLGCNWQCGDVPIPFPFGMKSSECYAGKWFEIECRNPSRYNHYTHTPYLKWIGLEVTSIYVEEGLVNINNPIYRSNCGSKDSSQVNQSLEGSPFVYSQKHNKFVAAGCNSIAVLKLNGSDVSGCVSICDQNYKVGDIGKIELINSDCNGKSCCENSLPPYLKEYSTEIKGLKENETSDECSYAMVVQQYQYHGYRPFFYNNGRKRYYFPVYGLVKDLDVVPAVLEWEILNNLNLTLPLDHHSECCDTNVTSSQYKRSGQRCSCKSGSGNPYLDGGCPDDPPPPQYRKSRSPLTISIIKEVSISFGSIILLLILWRVLTATKKTIVDKYRKRMFKRNGGLLLQQRLSSGEVNVDKVKIFNLKELEKATDNFNTNRVVGKGGQATVYKGMLINGTIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLFEYLHQQNEDFPMTWDIRLRIATEVAGALFYLHSAASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISSDVTHLTTVVQGTFGYLDPEYFQTSQFTEKSDVYSFGVVLVELLTGKRPITLTSSEEAKSLASYFILCVEQDCVFDIIDERVTKEGEKNHIMEVVNLANRCLELNGKRRPTMKEVTLELESIRKLEGKSNAQEKYNELVRSEDYQCWDDYSTILEIRSAFDLSSRTPTLEDIHIRTI 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00940 722 Pfam Protein kinase domain 397 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00940 722 Pfam Wall-associated receptor kinase galacturonan-binding 30 94 IPR025287 GO:0030247
Phco11g00940 722 FunFam Protein kinase superfamily protein 427 473 - -
Phco11g00940 722 SUPERFAMILY Protein kinase-like (PK-like) 377 664 IPR011009 -
Phco11g00940 722 ProSiteProfiles Protein kinase domain profile. 396 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00940 722 SMART serkin_6 396 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00940 722 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 674 IPR045274 GO:0007166
Phco11g00940 722 Gene3D Phosphorylase Kinase; domain 1 368 469 - -
Phco11g00940 722 FunFam Wall-associated receptor kinase 2 470 687 - -
Phco11g00940 722 Gene3D Transferase(Phosphotransferase) domain 1 470 692 - -
Phco11g00940 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00940 Phco-Chr11 6932318 6937153 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco11g00940 Pkinase 9.1e-47 CL0016