Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00936 ATGAAGAGTTCGGAGTGCTATGCAGGGAAATGGTTTGAAATAGAATGCAGAAACACTTCCACATATACCTATTACAGTCCCACACCTTACCTGAAGTGGATAGGACTGGAAGTGAAATCCATAGATCTCCAACTAGGCACGGTTAATATCAACAATCCCATTTACCGTAGTAACTGCGGATCCAAAGATTCTCGGCCGGTCAACCAGTCGCTAAAAGGAAGCCCTTTCGTGTATTCCCAGGAACACAACATATTTGTGGCCGCAGGTTGTAACAGCATTGCGATTTTGAAGTTAAATGGGTCAGAAGTTAGTGGTTGTGTGTCCATCTGCGACGAGAACTACAAGGTGGGTGATATCGGGAAAATGAAGCTTAGAAACCGTGATTGTAATGGGAAGTCCTGCTGTGACAGTTCCCTGCCACTGTACCTTACAGAATACAGCACTGTAATAAAAGGTTTAAAGGAGAATAAAAAGAGTACTGAGTGCAGTTACGCCATGGTTGTACAGCAATATCGGAACTACTACCGATCCGATTCTTATTATGATCCCAGAAGCTACTACATTGCTGTAGATGGTGTGGTGAAGGATTTAGATGTGGTCCCTGCAGTGCTTGAATGGGAGATTGTGAACAATTTGAACCTTACACTCCCTGCAGATCATTTCTCCTACTGTTATGATACTAATATTACATCTTCACGATATAAACGTTCAGGTCAGAGATGTTACTGTCGAACCGGTTACTTTTTCAATTACGGTAATCCCTACGTTGAGGGAGGTTGTACAGGAGTTTCTATAAGCTTTGGATCCATCATTTTACTCCTTATTTTATGGAGAGTGTTGAAGGCTACAAAGCAAACTATTGTGGAAAAATACAGAAAAAGAATGTTCAAAAGAAATGGAGGATTATTGTTACAACAAAGATTGTCTTCTGGTGAAGTTAATGTGGATAAAGTTAAACTTTTCAGCTTAAAGGAGTTGGAGAAAGTCACCGATAACTTCAACACGAATAGAGTAGTTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATCAATGGAATAATTATTGCAGTAAAAAAATTTAAGGTCCAAGGAAAAATAGAAGAATTCATCAATGAATTTGTCATTCTGTCACAAATTAACCACAGAAACGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTAAAATTCCTTTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTACTTGCATCAACAAAGTGAGGATTTTCCAATGACATGGGACATTCGTTTGAGAATTGCCACTGAAGTTGCTGGAGCTTTGTTTTACTTGCACTCTGCTGCTACTCATCCTATTTATCATAAAGATATCAAGTCAACAAATATACTTTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGTACATCTAGAATGATTTCCAGTGATGTTACTCACCTTACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATATTTTCAAACTAGTCAATTCACAGAAAAAAGTGATGTCTACAGCTTTGGAGTAGTTCTTGTTGAACTCTTAACAGGGAAAAAGCCAATAACCCTCACAAGTTCAGAGGAAGCCAAAAGTTTAGCTTCATATTTCATCATGTGTGTGGAGCAAGATTGTGTATTTGATATTATTGATGAAAAAGTGATGAAGGAGGGTGAGAAAAATCATATCATGGAAATTGTCAATCTTGCAAATAGATGTTTAGAGTTGAATGGAAAAAGACGTCCAACTATGAAGGAAGTGACATTAGAATTAGAAAGTATTCGAAAATTAACAGGAAAATCTAATGTACAAGAAGGACATAATGAACTTGTTAGAAGTGAAGACTATCAATCTTGGGATGATTATTCTACTATCTTAGAAATAAGGTCAGCTTTTGATCTAAAAAGCAGAACACCAAGCTTGAAAGATATTCATATTTGTCCCATATAA 1980 0.3737 MKSSECYAGKWFEIECRNTSTYTYYSPTPYLKWIGLEVKSIDLQLGTVNINNPIYRSNCGSKDSRPVNQSLKGSPFVYSQEHNIFVAAGCNSIAILKLNGSEVSGCVSICDENYKVGDIGKMKLRNRDCNGKSCCDSSLPLYLTEYSTVIKGLKENKKSTECSYAMVVQQYRNYYRSDSYYDPRSYYIAVDGVVKDLDVVPAVLEWEIVNNLNLTLPADHFSYCYDTNITSSRYKRSGQRCYCRTGYFFNYGNPYVEGGCTGVSISFGSIILLLILWRVLKATKQTIVEKYRKRMFKRNGGLLLQQRLSSGEVNVDKVKLFSLKELEKVTDNFNTNRVVGKGGQATVYKGMLINGIIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLFEYLHQQSEDFPMTWDIRLRIATEVAGALFYLHSAATHPIYHKDIKSTNILLDEKYRAKVADFGTSRMISSDVTHLTTVVQGTFGYLDPEYFQTSQFTEKSDVYSFGVVLVELLTGKKPITLTSSEEAKSLASYFIMCVEQDCVFDIIDEKVMKEGEKNHIMEIVNLANRCLELNGKRRPTMKEVTLELESIRKLTGKSNVQEGHNELVRSEDYQSWDDYSTILEIRSAFDLKSRTPSLKDIHICPI 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00936 659 SMART serkin_6 333 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00936 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Phco11g00936 659 SUPERFAMILY Protein kinase-like (PK-like) 317 607 IPR011009 -
Phco11g00936 659 Pfam Protein kinase domain 334 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00936 659 FunFam Protein kinase superfamily protein 364 410 - -
Phco11g00936 659 Gene3D Phosphorylase Kinase; domain 1 305 406 - -
Phco11g00936 659 ProSiteProfiles Protein kinase domain profile. 333 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00936 659 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 71 610 IPR045274 GO:0007166
Phco11g00936 659 FunFam Wall-associated receptor kinase 2 407 624 - -
Phco11g00936 659 Gene3D Transferase(Phosphotransferase) domain 1 407 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00936 Phco-Chr11 6892800 6899872 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco11g00936 Pkinase 1.2e-46 CL0016