Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00921 ATGGACCTCTTCGCCGCCGATCACTTTCCCATCCCCGACCACGTCGCTCCATTTCCCGATTCCGGCGACCTCCTATTCCCGCCCGATCCCCTCTCCCACCGACACAACCCCCAGAAGCTCCGCCCTATCCGGTCTCTCCCTTCCGCCCTCAATGTCCATCCTCGTCCGCCCGATCCGATTGCCTCCGGGTCGGGTCACACCCCGAGCCACGAATCTGACTCGGCTTTGGATGCGGAGGAGGAAGATGAGGATGATGACAATTCATCAGCAAGTACCGAAGGAAATGGCCCAAGAAAGAGGAGGAGAAAGACGGTGAGAAAGCTTGAAGGTTTTGTGAAGGATTTGGTGACAAAGGTGATGGAGAAGCAAGAGCAGATGCACAAACAGTTGGTGGAAATCATAGAAAACAAGGAAAGGGAAAGGATTAAGAGAGAAGAAGCTTGGAAGAATGAGGAGATGGAGAGAATTAGAAAAGAGGAAGAGGCTAGAGCCCAAGAAAAATCTCGAAATTTGGCCCTCATATCCTTCATTCAGAATCTGTTGGGCCACGAAATTCAAATCCCCCAACCAGTAGAAGCATTCTGCAAAAGAGAAGAGAATGAAGTTGAGGTGAATGCTCAAAAAGAATTTAATGGTGATCCCAGTAAGAGTAGATGGCCTGATGTTGAAGTACAATCACTTATCACAGTGAGAACTTCATTGGAGCACAAGTTCCGTTTCATGGGATCGAAAGGGTCAATATGGGAGGAGATATCTGAAGCAATGCATGGCTTAGGCTATAATCGATCTGCAAAGAAGTGTAAGGAGAAGTGGGAAAACATCAACAAGTACTATAAAAGGACAATAGGGAGTGGCAAGAAAAGGCGTCAAAATAGTAAAAGTTGCCCTTATTTTGATGAGTTGGACATTCTGTATAGAAACGGCCTCCTAAGTATTGGAAATGCCTTGAGCAATACCACTAATGCTCCCCAGATTGAAGAAAAGGAGTAG 990 0.4697 MDLFAADHFPIPDHVAPFPDSGDLLFPPDPLSHRHNPQKLRPIRSLPSALNVHPRPPDPIASGSGHTPSHESDSALDAEEEDEDDDNSSASTEGNGPRKRRRKTVRKLEGFVKDLVTKVMEKQEQMHKQLVEIIENKERERIKREEAWKNEEMERIRKEEEARAQEKSRNLALISFIQNLLGHEIQIPQPVEAFCKREENEVEVNAQKEFNGDPSKSRWPDVEVQSLITVRTSLEHKFRFMGSKGSIWEEISEAMHGLGYNRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKSCPYFDELDILYRNGLLSIGNALSNTTNAPQIEEKE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00921 329 Coils Coil 120 170 - -
Phco11g00921 329 Gene3D - 219 280 - -
Phco11g00921 329 MobiDBLite consensus disorder prediction 22 104 - -
Phco11g00921 329 PANTHER FI21293P1 57 317 - -
Phco11g00921 329 MobiDBLite consensus disorder prediction 75 89 - -
Phco11g00921 329 CDD GT1 217 281 - -
Phco11g00921 329 ProSiteProfiles Myb-like domain profile. 211 275 IPR001005 -
Phco11g00921 329 Pfam Myb/SANT-like DNA-binding domain 217 302 IPR044822 -
Phco11g00921 329 FunFam Trihelix transcription factor GT-2 219 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00921 Phco-Chr11 6801078 6802936 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco11g00921 Myb_DNA-bind_4 9.1e-21 CL0123