Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00816 ATGAAGCCTCAAGCTGCTGAGACCGATCTGTGCTCTCTCAAACGCTCCCCACCTTCAACCATGTCTTCTTCTTCTTCTTCTCTCATCACCACTCTTGTTGATCATAATAATAACCCTTCACACCCTCCTCAGTTAAGACCTCCTCGCCGTCGTTTTGCTTCTCACCACCTTCCTGAGATAAGTCTCAAAACTCCTATGGTTAGGCCTTATGTTCGATCAAAAATGCCCAGGCTTCGTTGGACACCAGATCTCCATCGCTGTTTCGTGCATGCAGTTCAAAGACTTGGAGGAGAAGACAGGGCCACACCAAAGTTGGTTTTACAGCTCATGAATGTAAAGGGGCTTACCATATCTCATGTCAAAAGCCACCTTCAGATGTACAGGAGCATGAGGCACGAGCAGATGAGTCAAGGTGCAAATAAGAATGATGTGGCTCCAGAGTTTCCAGCTTCCACATTCTCAACTCTGGGCCCAAGGTACGTCCAGCAGAATCCTCACCGAAGAAGCTGCACGGAAGAGCTTGTTCCAACCCATGCTCAGTGGAATGATTACGAGGAAGGGAGCTACAGTGGAAAGCAAGGGGGTAAATCGATTATAGGTTGTAACGGCAATGAAGAGACGATGCAGTCCTACATCATCTTCGAGGGTCTTCTGAATGAGCAGAGTGTTGAAGAGAATAAAATTGCTCCTGAAAAGGTGTCACTAGGGGGTGCCACCGGATACGAAAGAGAGCATGAAAGATTCCAAGACAGAACTACTACTGGCATAAGAGGAGGAGGAGGAGAGAGAGAGGGTGAACGCGCAGTGTCCTTATCAATGAGTTCCAGGGCTAATTCACATTCATTCTTCAATAGCAGCCACACTGGTCCAGATGCCAATGATGTCTCTCTTGAGCTCACGCTCTCTTAG 909 0.4774 MKPQAAETDLCSLKRSPPSTMSSSSSSLITTLVDHNNNPSHPPQLRPPRRRFASHHLPEISLKTPMVRPYVRSKMPRLRWTPDLHRCFVHAVQRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRSMRHEQMSQGANKNDVAPEFPASTFSTLGPRYVQQNPHRRSCTEELVPTHAQWNDYEEGSYSGKQGGKSIIGCNGNEETMQSYIIFEGLLNEQSVEENKIAPEKVSLGGATGYEREHERFQDRTTTGIRGGGGEREGERAVSLSMSSRANSHSFFNSSHTGPDANDVSLELTLS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00816 302 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 51 169 IPR046955 GO:0003700
Phco11g00816 302 MobiDBLite consensus disorder prediction 13 27 - -
Phco11g00816 302 FunFam Myb family transcription factor 74 132 - -
Phco11g00816 302 Gene3D - 75 133 - -
Phco11g00816 302 MobiDBLite consensus disorder prediction 250 302 - -
Phco11g00816 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 76 129 IPR006447 GO:0003677
Phco11g00816 302 MobiDBLite consensus disorder prediction 1 27 - -
Phco11g00816 302 MobiDBLite consensus disorder prediction 271 302 - -
Phco11g00816 302 Pfam Myb-like DNA-binding domain 78 128 IPR001005 -
Phco11g00816 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 132 IPR017930 -
Phco11g00816 302 SUPERFAMILY Homeodomain-like 74 130 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00816 Phco-Chr11 6013160 6015622 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco11g00816 Myb_DNA-binding 1.4e-07 CL0123