Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00794 ATGAGTTGCTTCCCATGCTGCAAATCAGATACCAAATCAACCTCTACCGGGGCTGTCTCCGGCAAAGTTTCCAAAGGAAGGAGAACATTCAAATCAGTAGCTGCGGCCATGTCTCTTAAAACAGGCAGCAGCAGGCATAGACAAATAGACGCAGAGATAAGAAAATTTGGAGCTGTGAAAAATGATGTCAAAGTATTCACATATGCACAACTTGTGGAAGCAACAAACAACTACAGTTCTGATAACCTGGTGGGTGAAGGTGGATTCGGGAACGTTTACAAAGGATACATAGACAGTGTTGGACAACCTGTAGCTGTGAAGGTACTGAACAGGGAAGGAGCACAAGGAACGCGCGAATTTTTTGCAGAAATTTTAATGCTAAGTATGGTGCAGCACCCAAACCTTGTGAGGCTCATTGGCTATTGTGCAGATGACCACCATAGGATTTTGGTTTATGAATTCATGGCTAATGGGAGTTTGGAAAATCACCTTCTTGACTTAGAAGAAGGTAAGGAGCCTTTGGATTGGAAGATCAGGATGAAAATAGCTGAGGGAGCAGCTAAAGGACTTGAATATTTGCATAACAGTGAAGATACTCCTATTATATACCGTGATTTCAAATCATCTAATATACTGTTAGATGACAACTTTAATCCTAAGCTCTCTGATTTTGGCCTTGCTAAGATTGGTCCTTTAGAAGGCCAGGAGCAGGTGACAACCAGGGTGATGGGAACTTTTGGTTATTGTGCACCAGAGTATGCTGCTACCGGTAAACTTAGCACAAAGTCGGATATTTATAGTTTTGGGGTTGTGTTTTTGGAAATAATCTCGGGTAGGAGAGTATTTGACACTACAAGAGCTACAGAAGAGCAAAACTTGATTGATTGGGCACTACCTTTGTTTAAGGACAGAACGAAGTTTACTCTTATGGCTGATCCTTTGCTTAAAGGTCAGTTCCCTGTGAAGGGCCTATTTCAAGCCCTTGCAGTGGCAGCAATGTGCTTACAAGAGGAACCTGACACACGACCTTACATGGACGATGTTGTGACGGCTCTTGCACATCTAGCAGTGCACAGAGTTGAAGAAAAAGACTTAGCCGGTGACTCTATAAAATGTGCTGGCCATGTTGAATCTTTCAGAGCTACAAGTTCTGCTGGATCCGAAAGAGCGTAG 1173 0.4297 MSCFPCCKSDTKSTSTGAVSGKVSKGRRTFKSVAAAMSLKTGSSRHRQIDAEIRKFGAVKNDVKVFTYAQLVEATNNYSSDNLVGEGGFGNVYKGYIDSVGQPVAVKVLNREGAQGTREFFAEILMLSMVQHPNLVRLIGYCADDHHRILVYEFMANGSLENHLLDLEEGKEPLDWKIRMKIAEGAAKGLEYLHNSEDTPIIYRDFKSSNILLDDNFNPKLSDFGLAKIGPLEGQEQVTTRVMGTFGYCAPEYAATGKLSTKSDIYSFGVVFLEIISGRRVFDTTRATEEQNLIDWALPLFKDRTKFTLMADPLLKGQFPVKGLFQALAVAAMCLQEEPDTRPYMDDVVTALAHLAVHRVEEKDLAGDSIKCAGHVESFRATSSAGSERA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00794 390 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Phco11g00794 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Phco11g00794 390 Pfam Protein kinase domain 78 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00794 390 CDD STKc_IRAK 84 352 - -
Phco11g00794 390 Gene3D Phosphorylase Kinase; domain 1 24 154 - -
Phco11g00794 390 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 51 154 - -
Phco11g00794 390 FunFam Serine/threonine-protein kinase PBS1 155 369 - -
Phco11g00794 390 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
Phco11g00794 390 PANTHER OS07G0668900 PROTEIN 3 363 - -
Phco11g00794 390 Gene3D Transferase(Phosphotransferase) domain 1 155 373 - -
Phco11g00794 390 ProSiteProfiles Protein kinase domain profile. 78 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00794 Phco-Chr11 5791933 5793881 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phco11g00794 Pkinase 2e-48 CL0016