Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00779 ATGGTTTCATGTTCTATTTCACTCTCTGATGAGGGTTCTATTCACTCTTCCATCACAGTACTACTTTGGCCATCACATAAGAACATGGATCAAAAGAAGGTTGGTGAAGCAGAAAAAGAAGGACGCGGCAAGAGCAAAATTGAATCTGACCCCATGATGGCTCCTCCTCCCAGTCCTCTAGCTCTGACTATTGGTCCTTCTGTCCCTTCATCCCAGCCACAGCTGCCGCCACAGGAATCATTGGAGCAGAAACTGGAGAAGTTCTGGGCAGAAAAATGGCAGGAAGTTAAGGAGACCTCTGATTCCAAGAATCACTGCTTGCCTTTGGCTAGGATTAAGAGGATAATGAAGGCTGATGGGGAAGTGAGAATGGTGTCAGCTGAGGCTCCTGTGGTGTTTGCCAAGGCTTGTGAAATGTTCATTATGGAGCTCACAATGAGGGCATGGAATAATACTGAGGAGAACAGGAGGAGGACACTTAGTAAGAGTGACATTGCATCTGCAATGTCAAAGTCTGATATGTATGATTTTCTTGTTGATATTGTCCCCAGGGAAGACACAAGGCCTCATCCAGTGTTTGCAGGCATACCAGGAACAACCATTGCTCCAACTCATCAACATGCTGCAGACCCACAATCTGGTGCTCCAACAATGCACATGGGAATGCCCATTCTTGATCAAAATCATCCTGAGCTGCAAACCCTTCCTTCTCCAACTCCAATGTCGCCCAACCCTGAACAAGAAAACAACCATGCTCCTGATTCAGATGACTGA 774 0.4638 MVSCSISLSDEGSIHSSITVLLWPSHKNMDQKKVGEAEKEGRGKSKIESDPMMAPPPSPLALTIGPSVPSSQPQLPPQESLEQKLEKFWAEKWQEVKETSDSKNHCLPLARIKRIMKADGEVRMVSAEAPVVFAKACEMFIMELTMRAWNNTEENRRRTLSKSDIASAMSKSDMYDFLVDIVPREDTRPHPVFAGIPGTTIAPTHQHAADPQSGAPTMHMGMPILDQNHPELQTLPSPTPMSPNPEQENNHAPDSDD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00779 257 MobiDBLite consensus disorder prediction 204 257 - -
Phco11g00779 257 FunFam Nuclear transcription factor Y subunit gamma 72 184 - -
Phco11g00779 257 MobiDBLite consensus disorder prediction 29 80 - -
Phco11g00779 257 SUPERFAMILY Histone-fold 92 178 IPR009072 GO:0046982
Phco11g00779 257 MobiDBLite consensus disorder prediction 64 79 - -
Phco11g00779 257 MobiDBLite consensus disorder prediction 29 47 - -
Phco11g00779 257 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 107 169 IPR003958 -
Phco11g00779 257 Gene3D Histone, subunit A 72 184 IPR009072 GO:0046982
Phco11g00779 257 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 72 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00779 Phco-Chr11 5651841 5655076 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phco11g00779 CBFD_NFYB_HMF 3.2e-18 CL0012