Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00778 ATGGATCAAAACCAGCATAGTCAAGCAGGAGGAAAGGGTCCAGCTCCAGCAGAAGAAGAAGCTGAAAGCATGAACCAATATGAATCCAACCCCACAGCACCCAATACCAATCCTCCAAATCAGACCGTTGGTGTTCCTGTACCTTCACCCTATCCTGGAGGGAATCGTTATGATCGGCAATGCAGAAAGCAGCTGCAGCAAGACCAAATGCGGCAAAGGATAAACAGCTTCTGGGCAAGACAGTTGAAGGAAATTGAGGAGAGCACTGATTTGAAGAGTCACAGCTTGCCTCTGTCGAGGATTAAGAAGATTATGAAGTTTGATGAGGATGTGAAGATGGTATCAACTGAGGCTACTATGCTGTTAGCCAAGGCCTGTGAACTGTTCATTATGGAGCTCACAATGAGAGCTTGGGCTAACGTTGAGGATGATAAAAGGAAGATAATTCAGAAGACTGATATTGCATCTGCAATCTCGATGAGTGATATGTTTGATTTTCTGGTTGACACTGTTCCCAGGGATGACACAGTCACAATGGGACATCAACTGCTTGCAGGCATTGCTCCAACACCAAATGAGAATGCTCCTTACCCTTATATGTCAATTCCTCACCATGTTGCAGGCCCACCACCACCATATGCTGCTCCAACAAATGCTCCTGAGGATGCTGCAAATCCATCCTGTTCCAACAGTCTCACCCCAAATGAACAAGACACTTCCAATTCGGATGATCATTGA 738 0.4566 MDQNQHSQAGGKGPAPAEEEAESMNQYESNPTAPNTNPPNQTVGVPVPSPYPGGNRYDRQCRKQLQQDQMRQRINSFWARQLKEIEESTDLKSHSLPLSRIKKIMKFDEDVKMVSTEATMLLAKACELFIMELTMRAWANVEDDKRKIIQKTDIASAISMSDMFDFLVDTVPRDDTVTMGHQLLAGIAPTPNENAPYPYMSIPHHVAGPPPPYAAPTNAPEDAANPSCSNSLTPNEQDTSNSDDH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00778 245 MobiDBLite consensus disorder prediction 1 58 - -
Phco11g00778 245 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 58 219 - -
Phco11g00778 245 MobiDBLite consensus disorder prediction 222 238 - -
Phco11g00778 245 SUPERFAMILY Histone-fold 65 167 IPR009072 GO:0046982
Phco11g00778 245 MobiDBLite consensus disorder prediction 203 217 - -
Phco11g00778 245 MobiDBLite consensus disorder prediction 199 245 - -
Phco11g00778 245 FunFam Nuclear transcription factor Y subunit gamma 60 173 - -
Phco11g00778 245 Pfam Core histone H2A/H2B/H3/H4 36 158 IPR007125 GO:0003677
Phco11g00778 245 Gene3D Histone, subunit A 57 173 IPR009072 GO:0046982
Phco11g00778 245 MobiDBLite consensus disorder prediction 23 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00778 Phco-Chr11 5642762 5643499 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phco11g00778 Histone 1e-17 CL0012