Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00749 ATGCATCCTGATCAGAGAAAAAAGTCATCCGTGGATGTGGATTTCTTTACAGAATATGGTGAGGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATTCACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAGCATGTTTCTGATGCTACTCGCATTCTTCGTGAGATTAAGCTTCTTAGACTTTTACGCCATCCAGATATTGTGGAGATCAAGCATATTCTCTTACCCCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTCTTTGAACTCATGGAATCTGATCTGCATCAGGTCATCAAAGCTAATGATGATCTGACGCCAGAGCATTACCAGTTTTTCCTGTATCAGCTTCTTCGAGGCTTGAAGTATATACACACTGCAAATGTATTTCACCGTGATCTAAAGCCAAAGAACATTTTAGCAAATGCTGACTGCAAGCTGAAGATTTGTGACTTTGGACTTGCCAGAGTGGCTTTCAATGATACCCCCACTGCTATTTTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTCTTTTCCAAGTATACACCGGCTATAGACATTTGGAGCATTGGCTGCATATTTTCAGAACTTTTGACCGGAAAACCACTTTTCCCTGGGAAGAATGTTGTTCATCAACTAGACCTTATGACTGATCTTCTTGGAACTCCATCTCCTGAAGCCATTGCTAGGGTGCGAAATGAGAAAGCTCGTAGATATTTGAGCAGCATGCGTAAGAAGAAGCCAGTTCCTTTCTCACAGAAGTTTCCAAATGCAGACCCCCTAGCTCTTCGTTTGTTAGAAAGAATGTTGGCATTTGAGCCCAAGGATCGGCCTACTGCTGAAGAGGCTCTAGCGGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCATCTGCTCAGCCAGTTACCAAGATGGAATTCGAGTTTGAGAGACGCCGAATAACAAAGGAAGATGTACGCGAACTTATATACAGAGAGATTCTGGAGTACCATCCAAAGATGTTGAAGGAATTTGTAGAGGGAGCAGAACCAACAGGTTTCATGTATCCAAGTGCCGTGGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAACATTACGGTAAAGGAGGAACTGTTGCTCCACCTGAGAGGCAACATGCATCTTTGCCCAGACCTTGTGTGTTGTATTCAGACAACAAAATACATAATACGTCGGAGGTTGCGGATGATCTGTCCAAATGTTGCATCAAAGAAGTAGAGAAACAACCGATAGATAGGAGTAATGTTATCCCTATGTCCCGGCTTCCTTTACAAGCACCTCAAAATATTCAAGGTGTGGCAGCAAGGCCCGGAAAGGTTGTTGGTTCAGTGATGCGATACAATAACTGTGGGGTAGCAGTGACGGCAGAAACTGAGCAGAGGAGGATGGTCAGGAATCCATCTGTTCCAGCTCAGTTCGCAGGGTCGAGCTGTTCATATCCTAGGAGAAACCCGGGCTATAAAAGTGAGAGAGGGGCAGAGGATGATGGGATTGAAGGTTCAAATGGACTGCAGCCAAAGCCTCAATACATGGCAAGAAAAGTGGCTGCTGCTCCAGGTGGACCTGGTGGTCAGTGGTATTGA 1692 0.4397 MHPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDSHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFSELLTGKPLFPGKNVVHQLDLMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFVEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNKIHNTSEVADDLSKCCIKEVEKQPIDRSNVIPMSRLPLQAPQNIQGVAARPGKVVGSVMRYNNCGVAVTAETEQRRMVRNPSVPAQFAGSSCSYPRRNPGYKSERGAEDDGIEGSNGLQPKPQYMARKVAAAPGGPGGQWY 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00749 563 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00749 563 MobiDBLite consensus disorder prediction 506 544 - -
Phco11g00749 563 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00749 563 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Phco11g00749 563 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Phco11g00749 563 CDD STKc_TDY_MAPK 24 361 - -
Phco11g00749 563 FunFam Mitogen-activated protein kinase 111 339 - -
Phco11g00749 563 FunFam Mitogen-activated protein kinase 15 119 - -
Phco11g00749 563 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Phco11g00749 563 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00749 563 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Phco11g00749 563 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Phco11g00749 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00749 Phco-Chr11 5366104 5371384 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Phco11g00749 Pkinase 1.4e-67 CL0016