Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00718 ATGATGCTGGTTCAATCCACTGGTTCCAAGGTGGATCTTCCGGAGGAGTTGCTACAAGTTCTGCCGTCTGATCCTTATGAGCAGCTTGATGTGGCTCGCAAGATCACCTCCGTTGCGCTCTCCACACGTGTCAACGCGCTCCAATCAGAGTCATCCACTTTGCGCGCCGAACTCGCCGATAGGGAGCAGCTCATCGCCGAGCTCCAGGCTCAGGTCGACTCCTTCGACGCCGCTCTCTCCGAAGCCGCCGATAAGCTGGCCCAAGCCGACCAAGACAAGGAGAGTTTGGTGAAGGAGAATGCTTCTCTTTCCAATGCGGTGAGAAAGCTCAGCAGAGATGTCTCCAAGTTGGAGAGTTTCAGAAAGACACTTATGAAATCACTTCACGAGGATGAAGATAATTCTGGAGGAACACCAGATACTGCCGCTAAGTTGCATAGTCAAGCAAGTATCACTTCCTCGTCGCAATTTGGAGATGAAGATGCTTCAACGCCTTCTTCTAGATCTTCTTCAATGCGACTAAACCCTTCTGATACGTCAAATTATTTTGCAGAGGATCGTGAGTCTGATGGTTCAAGATCTGGAGCATCACATAATGTTGTGTTATCATCTCAAAGTAGCACCCCTCGCATTACTCCTCCAGGTTCCCCTCCTAGTAGGTCTGCACTGGTATCCCCAACAAGAACATCATCTAAGCCTGTGTCTCCAAGGCGCCATGCAATGTCCTTCTCAACCTCAAGAGGAATGTTTGATGATAGGTCCTCAGTAGCCTCACAAACTGGTGACTCCCTTCAAATCATTAATTGCCTTTCTTGCATATGTCGAACACGGGTGGATGGAAAAGAGTTTTTTCGCCAAGTTAGGAGTCGCTTATCTTATGAGCAGTTTGGTGCATTTTTAGCAAATGTGAAGGAACTGAATTCTCATAAACAAACCAAAGAGGAAACACTACAGAATGCTAATGAAATTTTTGGGGCTGAAAACAAAGACCTCTATACTATATTTGAGGGATTGATAATGCGCAATGAAAACACAGAAAAATCATGCCAACCGCTACTTTCATGTCTCTCCATCTCTCTTTCTCTCTCTCCCTCTCTTTCTCTTCTCCTCCTCTCTGACTCTACATGCGTGCACGTCATTCCCGTGGCAACCCTTTTGGTTCTCGGAAACTCGTCTTGCTTAGCCTTGGCCACCATGAACGATGAACGAGAACCAACAGCTTCCCCGAGCAATGGCGTCCACAAGATAGAAAGAAAACAAATATTTGAAAAGGAGAAATCTCTTTTTAAAGGGAGACGTCCACGACCTGGGTTTTCTGATTCATTCTCAAGTATTGAATTGGAAACTTTAGACATTGAAGAGGGAGGCCCACCTGAGCACTCTCCTAGGAGTCAAGGGTCTGAAACCCCAAGTTCAAGGACCAGCACTTCTGATTCGGAGAGTCAGGGGTCTTTAGTAGGAAATTCACCTAATTCTAATAACCAATGGCGTGGGTTCTTTAAGTTACTGAAGAAAGGATCCCAAATGCCTTTCCAAACTTTTCATCCCCTTAAAAATGTTCCTAAACTGACAAGAAGAAAAAGCAAGAGAATCAGGGAGGACCTGATTCCATCTTTGAATTCTCCAGCTCTTCAGTCATCTCTTGGCACTGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCACTCTCGCAGAGATCTTGACCGCAACAGACGAATTTAGCCAAGTTAATTTGATCGGGGAGGGAGGCTATGCTGAGGTTTATTTAGGCAAATTGGAAGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGAACCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTACATGTGGATCACCCCAATATAGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCTTGTCATCTATACTTTATGGACCTAGAGAGAAACTAAATTGGAGACTCAGATATAAGATTATTCTGGGGACTGCTGAGGGCCTCCGCTATCTGCATGAAGAATGTCAAAGAAGGATCATTCACAAAGACATTAAGGCTTCTAATATTTTGCTCTCAGAGGATTTTGAGCCCCAGATATCCGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTCGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTGCTATTATTGGAGCTCATTACTGGTCGACAAGCTTTGGATAGCTCACAGAGAAGCCTGGTGATGTGGGCAAAACCTCTGCTATCTGCAAACAATATCAAAGCCCTAGTCGATCCAGTTTTGGTTGATGCTTACGATGAAGAGCAGATGAAACTTGTAACCTTAACAGCTTCTCTATGTGTAGACCAGTCTTCGATTCAGCGACCAGATATGAGCCAGGTGTTGGAGATACTAAGAGGGGATGAAGAAATCCTAAGCATCATGAAAGAACGGTCGAAGGTAAAACTTCAGAGGACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACGAAGTTTTTGAGTGAGAGGGATCGACATATGGAGACTATTCTAGGATCAGTTACAGACGAAGATAAAGTCTAG 2694 0.4447 MMLVQSTGSKVDLPEELLQVLPSDPYEQLDVARKITSVALSTRVNALQSESSTLRAELADREQLIAELQAQVDSFDAALSEAADKLAQADQDKESLVKENASLSNAVRKLSRDVSKLESFRKTLMKSLHEDEDNSGGTPDTAAKLHSQASITSSSQFGDEDASTPSSRSSSMRLNPSDTSNYFAEDRESDGSRSGASHNVVLSSQSSTPRITPPGSPPSRSALVSPTRTSSKPVSPRRHAMSFSTSRGMFDDRSSVASQTGDSLQIINCLSCICRTRVDGKEFFRQVRSRLSYEQFGAFLANVKELNSHKQTKEETLQNANEIFGAENKDLYTIFEGLIMRNENTEKSCQPLLSCLSISLSLSPSLSLLLLSDSTCVHVIPVATLLVLGNSSCLALATMNDEREPTASPSNGVHKIERKQIFEKEKSLFKGRRPRPGFSDSFSSIELETLDIEEGGPPEHSPRSQGSETPSSRTSTSDSESQGSLVGNSPNSNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSLGTEFGCFKSSWKNFTLAEILTATDEFSQVNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWRLRYKIILGTAEGLRYLHEECQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQRSLVMWAKPLLSANNIKALVDPVLVDAYDEEQMKLVTLTASLCVDQSSIQRPDMSQVLEILRGDEEILSIMKERSKVKLQRTYSEELLDAEEYNSTKFLSERDRHMETILGSVTDEDKV 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00718 897 MobiDBLite consensus disorder prediction 194 210 - -
Phco11g00718 897 Gene3D Phosphorylase Kinase; domain 1 539 648 - -
Phco11g00718 897 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 651 853 - -
Phco11g00718 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Phco11g00718 897 ProSiteProfiles Protein kinase domain profile. 574 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00718 897 SUPERFAMILY Protein kinase-like (PK-like) 556 839 IPR011009 -
Phco11g00718 897 MobiDBLite consensus disorder prediction 140 182 - -
Phco11g00718 897 Coils Coil 303 323 - -
Phco11g00718 897 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 544 648 - -
Phco11g00718 897 Coils Coil 51 113 - -
Phco11g00718 897 Gene3D Transferase(Phosphotransferase) domain 1 651 862 - -
Phco11g00718 897 Pfam Protein tyrosine and serine/threonine kinase 578 838 IPR001245 GO:0004672|GO:0006468
Phco11g00718 897 PANTHER OS08G0249100 PROTEIN 428 873 IPR046958 -
Phco11g00718 897 SMART serkin_6 574 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00718 897 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Phco11g00718 897 MobiDBLite consensus disorder prediction 128 243 - -
Phco11g00718 897 MobiDBLite consensus disorder prediction 451 493 - -
Phco11g00718 897 MobiDBLite consensus disorder prediction 221 243 - -
Phco11g00718 897 MobiDBLite consensus disorder prediction 462 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00718 Phco-Chr11 5155433 5163274 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phco11g00718 PK_Tyr_Ser-Thr 4.4e-39 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00718 11 5155433 5163274 Phco11g00718 11 5155433 5163274 ECH