Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00705 ATGAACCAGTACCACATCTACGAAGCCATCGGTCGCGGCAGATACTCCACCGTTTACAAAGGCAGGAAGAAGAAGACTATCGAGTATTTCGCCATCAAGAGCGTCGATAAATCGCAGAAAACTAAGGTCCTTGAAGAGGTCAGGATTCTTCACACGTTGGATCATATAAATGTGCTGAAGTTTTATGATTGGTACGAAACTTCTGCTCATCTATGGTTGGTTTTGGAGTACTGCGTCGGAGGGGATCTGCTTTCCATATTACGACAGGATAGTAAACTTCCCGAAGACTCTGTTCACGATCTTGCGTATGATCTAGTGAAAGCTTTGCAGTTTTTACATTCAAATGGAATAATTTATTGCGACCTGAAACCATCAAATATTCTACTAGATGAAAATGGATGCGCAAAGCTATGTGATTTTGGATTGGCTAGGAAGTTGAAAGATATATCAAAAGCTCCTTCTTCCTCGTTACCACGGGCAAAGCGTGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTCCATTCTTATGCTTCTGACTTCTGGGCACTAGGCTGTGTACTATATGAATGTTATGCTGGGCGGCCACCCTTTGTGGGAAGAGAATTCACTCAGCTTGTAAAATCCATCATCTCAGATCCGACTCCTCCTCTCCCTGGTAATCCAAGTCGACCTTTTGTTAATTTAATCAATTCCCTGTTGGTAAAGGATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCTGTTTGGAGAACCAAACTTGCTCTGGTGTCTCTGCCTTCTCAACCTGCATTTGATGATATGATAGAGCTACAAACTAAACCTTGCTTATCAGAACGAAATGGAGATAAATCTTCTCATAACCGGACACCTCCCAAATATCGTGAAAAAGATGTCAAAGGGGTGTTGAAGAAGGACGAGAACTCTGTTTTAGGATCTAGAGGCACTGAGACACCAACAAGGGCAACACCAAATGGCCCTAGAACTCAGATAAAAGGATCAAGCAGAACAAATGAGGTAAAGCAGAAAGACCATTCCAATGTTAAGAAGGGTGTGAATCTGTTGAGATTGTCAAGAATAGCGAAAACAAATTTACAGAGGGAAAATGAGAAAGAAAACTATCGACGCCCCTTGCCTAATAATTCTGAGAATGATTCTGAAGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAATGAGAATACTGAAGATGATACTCATGAAGAAACTGATGGCAATGAACAAACAACTTCTGTGCCAGATGAGAAGATAGATAATCATTTTCTGAATCAGGGACAAACAGAGGACATTGAAAATAATACACACCAGTTGGATACCCCATCTGCTGTTAACCCTCCAGTCTCAGATGATCCAAGGTCATTTGATCATGAATCAACTCCTGACCATCCTGACATATCTGGTATTTCTCCCAGTGTGAGCCCTCAGGTGAAAAAGCATAGAGCTAAAGAAGACTCAGGATCTGGCCTTGACTCTGATTCTTCAAGGTTGTCTAACAACCTTTCCGAGGTTCTTTGGCATCCATCTGATCTGTCAGTCAGACCTGTAATGCCTAGCAGAAAAGTTGATAAAGTCTCAGAAGTCATTCCTTCACTCCCTTTTGAGGCATTGCAAGCGTCTGATTTTGTTAAGATGCCTAAAGAGCAACTGGAGGCAGTCCACAACCGAATATTAACCATTTTGAATGGAAATACCAGCATTGGAGAGAAACAAAATGTGATTAGGTATCTTGAGATGTTGAGCATTAATGCTGATGCAGCTAATATCTTGACCAATGGGCCAATTATGCTCATGCTTGTAAAATTGCTTCGGCAATCCAAGGCAGCAGCTTTGCGTGTGCAACTTGCTTCACTGATTGGTCTGTTGATTAGGCACTCCACTTTTGTTGATGACAGTTTGGCTAATTCTGGAATATTAGGTGCACTGACTGATGGCCTTAGAGACAGGCAGGAAAAAGTAAGGAGGTTTTCCATGGCCGCTTTGGGTGAGTTGCTATTTTATATATCTACTCAAAATGCAGACTGCAGGGATAACAATCAACTTGAATCTCCATCAAAGGACAATAGGGCAACATATGGCTGGCAGGTTCCAAATTCGTTAATTTCACTCGTGTCATCAATGTTGAGGAAGGGCGAGGATGATATAACTCAATTGTATGCATTGAGAACCATAGAGAATATTTGCAGTCAAGGAGGGTTCTGGGTGGGGCGATTGACCAGTCAAGATGTTTTTAGTAATCTCTGTTATATCTATAGGGCGGCAGGGAAACAAGAGAGTATGAGGCTCACTGCAGGATCATGCTTGGTGCGCCTTGTTCGTTTTAATCCTACTAGCATTCAGTCTGTTGTTGAGAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTAAAGGGCAGTCCACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACATAGCAATGCTTGGAAGTCACTTGTTCACAAACATTGGAAGATACCTTGTACAACTTGCCGAGGATAAAAATCTGATCCCAAGTCTTTTGGCTCTTGTTGAGCAAGGTAGTGAAGTTTTAAGAGGAAAGGCACTAGTTCTTGTGGCTCTCCTCTGTAAGCATGGCAGGAGGTGGCTTCCACACTTCTTTTGTAGTCAAAAGTTGCTTTCTGTGGTGGATAGACTGGGAAAAGAGAAAGATTCCTATGTGAGACAGTGTTTGGATGCATTTGTGCATATTGTGGCATCCAGTATTCCAGGTTTATTGGATATAATAACAGGGGAGGTCCAGCAAATGATGGGAGGAAGGCGCCATGGACACATCTCTGCCCTTACCAGCAGATCTTCAAAAGCCAACATTCATTTGTTTCCTGTTGTCCTTCATCTTCTTGGAACTTCAACTTTTAAGCAGAAAGTCGTGACACCACAAGTTGTACTTCAATTGGCGAATCTAATTAAACTCGTCGAGACACCATTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGAATTTTCGAGTCTCTCACAGAGGAATCTCCTATAATTCTTGGCAATGCTGACATTTTCATTCGTGAAATCCTCCCTAGTTTGACAGTTCTCTACAAGGGTAACAAGGATGGTGACGCCAGGTTTTTGTGCCTTAAAATTCTTTTTGATGTGATGATCATTCTTTTGAGTGAACCAATTGACGAAGAGCAACGATTAAAGGATCTGAAATTCATATCAAATACCCGTTTTCTTCCTCTCTACCCAACCTTGATTGAAGATGAAGATCCTATTCCTATTTATGCCCAGAAGCTTCTTGTTATGCTGCTGGAGTTCAGTTTTATTGCAATTCCAGACATTCTACATATGAAGACAATTTCACAATGCTTTGAGTTCTTGCTTGGTGATCTCTCGAATGCAAATGTGAATAATGTTAAGCTGTGTCTTGCTCTAGCTTCTGCTCCTGATATGGAGTCCAAATTACTCTCTCATTTAAAGGTGGTTAGGAGGATTGGCAACTTACTTGAGTTTGTACATGCAAAAGGCATGGAAGATTTACTGGAACCAACTCTTGGGTTGTGTAGGGCTTTTATAGCACGTTCAGTCTGTACAAAAGGCTTGAGCAGCACAACAGAACCAACTCTCTTAGGTGACTGTCCTCCCGAGTTGAGTGGTGGTGCTGTTGATCCCCAGCAATGCATAAAAGATATCGCTGACTTTGGAAGCAATTATGGTGTCTTGCTAGAGTTGAGTGCCTCTGCAGAAACCAGTATTGCCGATATAGCTTCTGAATGTGTTGTTTTACTGTTCAAGGCAGCTCCTAGAGAAGCCACCACTGGTATACTAACCAATCTTCCCAAGGTCACTGTGATCCTAGAGAGCTGGAATAGAGGCATTCCTCACTTGATGGTGCAGCGAATGCTTCATTCTTTAGGTTATGCTTGCAAGCAATACTTACTGCATGCAATGATATTGTCAATATCTAAACCGGAGATTTCAAGAATTGAAGTTGTTGTTTCTGAACTCAAAAGTTCAGGTGTACCAGCCTTAGCTAAAACTGCTGCGCTAGCAGCCTTGGAATTGCAGCGGTTGCCTCGCTGCATTTGA 4110 0.4214 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLEEVRILHTLDHINVLKFYDWYETSAHLWLVLEYCVGGDLLSILRQDSKLPEDSVHDLAYDLVKALQFLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKAPSSSLPRAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAVWRTKLALVSLPSQPAFDDMIELQTKPCLSERNGDKSSHNRTPPKYREKDVKGVLKKDENSVLGSRGTETPTRATPNGPRTQIKGSSRTNEVKQKDHSNVKKGVNLLRLSRIAKTNLQRENEKENYRRPLPNNSENDSEVKIENTDMELDFNENTEDDTHEETDGNEQTTSVPDEKIDNHFLNQGQTEDIENNTHQLDTPSAVNPPVSDDPRSFDHESTPDHPDISGISPSVSPQVKKHRAKEDSGSGLDSDSSRLSNNLSEVLWHPSDLSVRPVMPSRKVDKVSEVIPSLPFEALQASDFVKMPKEQLEAVHNRILTILNGNTSIGEKQNVIRYLEMLSINADAANILTNGPIMLMLVKLLRQSKAAALRVQLASLIGLLIRHSTFVDDSLANSGILGALTDGLRDRQEKVRRFSMAALGELLFYISTQNADCRDNNQLESPSKDNRATYGWQVPNSLISLVSSMLRKGEDDITQLYALRTIENICSQGGFWVGRLTSQDVFSNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPTSIQSVVEKLSFKDLASALVKGSPREQQISLNLLNIAMLGSHLFTNIGRYLVQLAEDKNLIPSLLALVEQGSEVLRGKALVLVALLCKHGRRWLPHFFCSQKLLSVVDRLGKEKDSYVRQCLDAFVHIVASSIPGLLDIITGEVQQMMGGRRHGHISALTSRSSKANIHLFPVVLHLLGTSTFKQKVVTPQVVLQLANLIKLVETPFQGRDDFQITLLRIFESLTEESPIILGNADIFIREILPSLTVLYKGNKDGDARFLCLKILFDVMIILLSEPIDEEQRLKDLKFISNTRFLPLYPTLIEDEDPIPIYAQKLLVMLLEFSFIAIPDILHMKTISQCFEFLLGDLSNANVNNVKLCLALASAPDMESKLLSHLKVVRRIGNLLEFVHAKGMEDLLEPTLGLCRAFIARSVCTKGLSSTTEPTLLGDCPPELSGGAVDPQQCIKDIADFGSNYGVLLELSASAETSIADIASECVVLLFKAAPREATTGILTNLPKVTVILESWNRGIPHLMVQRMLHSLGYACKQYLLHAMILSISKPEISRIEVVVSELKSSGVPALAKTAALAALELQRLPRCI 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00705 1369 MobiDBLite consensus disorder prediction 370 431 - -
Phco11g00705 1369 MobiDBLite consensus disorder prediction 287 318 - -
Phco11g00705 1369 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Phco11g00705 1369 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00705 1369 SUPERFAMILY ARM repeat 567 919 IPR016024 -
Phco11g00705 1369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Phco11g00705 1369 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Phco11g00705 1369 MobiDBLite consensus disorder prediction 283 358 - -
Phco11g00705 1369 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1366 IPR044591 GO:0000911|GO:0000914|GO:0008017
Phco11g00705 1369 Pfam Protein kinase domain 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00705 1369 MobiDBLite consensus disorder prediction 319 343 - -
Phco11g00705 1369 CDD STKc_ULK4 3 257 - -
Phco11g00705 1369 MobiDBLite consensus disorder prediction 450 510 - -
Phco11g00705 1369 MobiDBLite consensus disorder prediction 370 385 - -
Phco11g00705 1369 FunFam Aurora kinase A 1 81 - -
Phco11g00705 1369 Gene3D - 557 917 IPR011989 -
Phco11g00705 1369 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00705 1369 MobiDBLite consensus disorder prediction 404 418 - -
Phco11g00705 1369 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00705 Phco-Chr11 5024703 5031141 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Phco11g00705 Pkinase 5.6e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00705 11 5024703 5031141 Phco11g00705 11 5024703 5031141 ECH