Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00696 ATGGGGTGTGCGTTTGGGAGAGAGTCTTCGAGGGAGGAGAGGAGAGAGGAAGTGAGAGAGGCAAAAGCTGAGGTGGGTAGAGCAGAGGTTGTTGAGAATGAGAACATTGAGAAGGAGAAGGAGAAGGAGGTTGGAAGAGAAGAGAAGAGGACAAGGGCAAGGGGAGAGAGGAGGCGATCTTCGAAGCCGAAGCCGAATCCGAGGTTGAGCAACCCACCTAACCATGTTCATGGTGAGCAGGTTGCAGCAGGGTGGCCCTCTTGGCTCTCTAAGGTTGCTGGTGAAGCCATCAACGGATTGACGCCTCGGAGAGCTGACACCTTTGAGAAGCTTGATAAGATCGGGCAAGGCACATACAGCAATGTTTACAAAGCTAGGGATTCTTTGACGGGAAAAATTGTTGCTCTAAAGAAGGTCCGTTTTGACAATTTAGAGCCTGAAAGTGTGAAGTTTATGGCCAGGGAGATTTTGATTCTCCGTCGTCTAGATCATCCCAATGTCATCAAACTTGAAGGCTTAGTGACTTCTAGAATGTCGTGCAGTTTATATCTTGTATTTGAATACATGGTGCATGATCTAGCTGGACTTGCCACAAACCCGGCAATTAAGTTCACAGAATCTCAGGTAAAATGTTATATGCATCAGCTATTTTCGGGACTGGAGCACTGTCACAACCGTCATGTGCTGCATCGCGATATAAAGGGGTCAAACCTTCTTATTGATAATGACGGAACGCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTATGATCCTAATCACAAGCACCCTATGACTAGTAGAGTGGTTACATTATGGTATCGACCTCCAGAACTTCTTCTTGGGGCCACTGAATATAGTGTAGGCGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTATTGGCTGGAAAGCCTATTATGCCTGGTCGAACGGAGGTGGAACAACTACACAAGATATTTAAGCTATGCGGTTCTCCTTCCGATGAATATTGGAAGAAATCAAAGTTGCCACATGCTACCATTTTTAAGCCCCAGCAGTCATACAAGCGATGTATTGCAGAGACATTTAAAGATTTTCCTCCATCATCCCTGCCACTTATTGACACCCTTCTCTCAATTGATCCAGATGAACGTTTGACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAAGCCATATGCCTGTGACCCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAAAGCTAATGTTGATGGTGTCAAGAAATCTCGTCCACGTGAGCGACGGGGAAATCCAGTTCCAGAGGCCAATGCTGAACTGCAAGCAAATATTGATAGACGGCGGCTAATCACACATGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAGCTCTAGGCTATCCACTGGGTTCTTCACATCACATGGATCCAGTGTTTGATCCTCCTGATGTTCCATTTAGTTCCACAAACTTCTCACAACCTAAAGCAAATATCCAAACCTGGTCCGGCCCATTGGTAGATTCTTCTAGTGTGGGCGCACCAAGGAGAAAGAAGAAACATGGAAAGTGA 1635 0.4618 MGCAFGRESSREERREEVREAKAEVGRAEVVENENIEKEKEKEVGREEKRTRARGERRRSSKPKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDSLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTESQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGTLRIADFGLASFYDPNHKHPMTSRVVTLWYRPPELLLGATEYSVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIDTLLSIDPDERLTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANVDGVKKSRPRERRGNPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKANIQTWSGPLVDSSSVGAPRRKKKHGK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00696 544 MobiDBLite consensus disorder prediction 427 544 - -
Phco11g00696 544 MobiDBLite consensus disorder prediction 7 54 - -
Phco11g00696 544 SMART serkin_6 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00696 544 ProSiteProfiles Protein kinase domain profile. 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00696 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Phco11g00696 544 Gene3D Phosphorylase Kinase; domain 1 96 190 - -
Phco11g00696 544 SUPERFAMILY Protein kinase-like (PK-like) 103 398 IPR011009 -
Phco11g00696 544 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Phco11g00696 544 Coils Coil 28 48 - -
Phco11g00696 544 MobiDBLite consensus disorder prediction 507 529 - -
Phco11g00696 544 MobiDBLite consensus disorder prediction 427 449 - -
Phco11g00696 544 Gene3D Transferase(Phosphotransferase) domain 1 191 431 - -
Phco11g00696 544 FunFam probable serine/threonine-protein kinase At1g54610 191 432 - -
Phco11g00696 544 MobiDBLite consensus disorder prediction 1 79 - -
Phco11g00696 544 MobiDBLite consensus disorder prediction 457 479 - -
Phco11g00696 544 Pfam Protein kinase domain 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00696 544 FunFam probable serine/threonine-protein kinase At1g54610 95 190 - -
Phco11g00696 544 CDD STKc_CDK9_like 108 392 - -
Phco11g00696 544 PANTHER CELL DIVISION PROTEIN KINASE 106 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00696 Phco-Chr11 4966615 4971155 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco11g00696 Pkinase 3e-69 CL0016