Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco11g00678 | ATGGAGCAGTACGGCCGGTCCAGTGAAGGTTCGCGGTCTGATCCGTCCCCGGAATGGGCCGGGCCCGGAGCCCAAACCGGCCTCGAAGAGCCTATGTGGCAATTGGGAATGGCTGCTGCGGAGGAATCGTATCCGCAACGCCCCGATGAGGCTGATTGCACTTACTACTTGAGGACTGGCTTCTGTGGCTTTGGTTCGCGGTGTCGGTTCAATCACCCTCGTGACCGTGGCACGGTTGTTGGAGCTGAGAGGACTGCTGGGGAGTATCCGGAACGAGTTGGCCAGCCTGTCTGCCAGTATTATATGAGGACAAGAACGTGCAAGTTTGGTTCGTCTTGCAAGTACCACCACCCGAGGCTAGCGGGAGGTGCTGCTGCCCCTGTGACGCTAAACTATTATGGATATCCATTGCGTCCGGGTGAGAAGGAGTGTTCGTATTATGTGAAAACGGGACAATGCAAGTTTGGTGCAACTTGTAAATTTCATCATCCGGTTCCTGCTGGCGTCCAAATTCCAGCACCATCACCAGTTGCTCCAGTTTCTCCTTTGCCTGTACCAGTGCCTTCACCGTTATATTCAACCATGCAGCCCCCACCTGGTCCTTCATCACAGCAAATTGGTGTGCTGGTTGCAAGGCCTCCTCTGCTGCCTGGCTCATTAGTCCAGAGTCCCTATGGACCTGTGGTACTTTCACCTGCCATGGTACCTATTTCTGGCTGGGGTCCTTATCAAGCTTCTGGAACAGGTGCTGTACTTCCTTCGGGTACTCCTAATGTTGGTTCAGCACAGCTTTACGGGATAACACAACTACCTTCATCAGCGGCCACCTATCCTGGACTTTATCAACTTCCTGGTTCCTTAGTTGGTCCATCAAGCAGTAATCAGAAGGAGCAGGCATTTCCAGAAAGGTCTAATCAACCAGATTATCAGTATTATCCGAAAACAGGGGAGGTTAAAGTTGGTCCATCCTATAGGTATCACCCTCCAACAGAAATAACTGCACCAAAAGCAAATGTGACTCTTAGTCCTGCAGGTCTTCCTTTGCGCCCGGGCGCATCACCTTGCACTCATTATGCACAACATGGAGTATGTAAGTTTGGTTCTGCATGCAAATTCGATCATTCTATGGGATCACTGAGTTATAGTCCATCTGCTTCTTCCCTGGCTGACATGCCTGTTGCACCCTATCCTGTGGGTTCAACAATTGGTACTCTTGCTCCATCATCTTCATCATCAGAGTTGCGGCCCGAATTTTCCTCTGGATCCAGCAAGGAGTCTGTTCCATCCAGAATGTCTTCATCAGCAGGAATGTTGACCGGGTCAATTGGCTTGACTTTGTCAACTGGTGGACCCATTTCTCAATCAAATAGTCAGCCATCTGCTCCAAGTTTGGATCCATCAGCCACTGCCACTAGTACTACAAGTAGCAATGTCTCACACACCTCAAGCTAA | 1452 | 0.5055 | MEQYGRSSEGSRSDPSPEWAGPGAQTGLEEPMWQLGMAAAEESYPQRPDEADCTYYLRTGFCGFGSRCRFNHPRDRGTVVGAERTAGEYPERVGQPVCQYYMRTRTCKFGSSCKYHHPRLAGGAAAPVTLNYYGYPLRPGEKECSYYVKTGQCKFGATCKFHHPVPAGVQIPAPSPVAPVSPLPVPVPSPLYSTMQPPPGPSSQQIGVLVARPPLLPGSLVQSPYGPVVLSPAMVPISGWGPYQASGTGAVLPSGTPNVGSAQLYGITQLPSSAATYPGLYQLPGSLVGPSSSNQKEQAFPERSNQPDYQYYPKTGEVKVGPSYRYHPPTEITAPKANVTLSPAGLPLRPGASPCTHYAQHGVCKFGSACKFDHSMGSLSYSPSASSLADMPVAPYPVGSTIGTLAPSSSSSELRPEFSSGSSKESVPSRMSSSAGMLTGSIGLTLSTGGPISQSNSQPSAPSLDPSATATSTTSSNVSHTSS | 483 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco11g00678 | 483 | Gene3D | - | 45 | 124 | - | - | |
Phco11g00678 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 140 | 164 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 95 | 119 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 49 | 74 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 352 | 376 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | SUPERFAMILY | CCCH zinc finger | 140 | 165 | IPR036855 | GO:0046872 | |
Phco11g00678 | 483 | SUPERFAMILY | CCCH zinc finger | 49 | 75 | IPR036855 | GO:0046872 | |
Phco11g00678 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 92 | 120 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | SUPERFAMILY | CCCH zinc finger | 352 | 379 | IPR036855 | GO:0046872 | |
Phco11g00678 | 483 | PANTHER | PROTEIN PHOSPHATASE RELATED | 30 | 411 | - | - | |
Phco11g00678 | 483 | MobiDBLite | consensus disorder prediction | 291 | 311 | - | - | |
Phco11g00678 | 483 | Gene3D | - | 125 | 171 | - | - | |
Phco11g00678 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 47 | 75 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Phco11g00678 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 138 | 166 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | MobiDBLite | consensus disorder prediction | 405 | 483 | - | - | |
Phco11g00678 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 349 | 377 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | MobiDBLite | consensus disorder prediction | 291 | 312 | - | - | |
Phco11g00678 | 483 | SUPERFAMILY | CCCH zinc finger | 95 | 118 | IPR036855 | GO:0046872 | |
Phco11g00678 | 483 | SMART | c3hfinal6 | 138 | 165 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | SMART | c3hfinal6 | 349 | 376 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | SMART | c3hfinal6 | 92 | 119 | IPR000571 | GO:0046872 | |
Phco11g00678 | 483 | SMART | c3hfinal6 | 47 | 74 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco11g00678 | Phco-Chr11 | 4842087 | 4851831 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Phco11g00678 | zf-CCCH | 9.2e-08 | CL0537 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco11g00678 | 11 | 4842087 | 4851831 | Phco11g00678 | 11 | 4842087 | 4851831 | ECH |