Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00640 ATGGAAGAGGATGAGATTCAAGCACAGGCAGTGTGTAAGTTCCCTAGAGTTGGAAATGGAAGGAGCGACCAATACCAAGAGGAGGAAGAAGAAGGAGACATAAGAAGAAGAGGTATTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAAGTGATGCTAGCACAAACCATTTCCAAAGCAGTTGGCACCACTCTTCGAGAATCATAAGGGTTTCTCGTGCATCTGGTGGCAAAGACAGGCACAGCAAAGTGATGACTTCAAAGGGGTTAAGAGATAGAAGGGTTAGGCTCTCGGTGACCACAGCCATTCAGTTCTACGACCTTCAAGATCGGTTGGGTTATGACCAACCTAGTAAGGCTGTGGAGTGGTTAATCAATGCTGCTTCAGATGCTATCTCAGAGCTCCCTTCTCTCAACAACCCCTTCCCTGATACCCCTAAGCAGCCAAGTGATGAGAAAAGGCCAACTAGTGGTCAACGTGGTGGTCAACCACAGGCCTTTGACGAGGTAGATGGAGACACCAATTTCCTCCAGCAAAGCCAAAACCAAAGCCAGAACCTCTCTCTCTCCAAGTCCGCTTGTAGCAGCACTTCCGAGACAAGCAAGGGTTCAGGCTTGTCCCTCTCAAGGTCTGAGATCCGTGTGAACCGTGTGAAGGCAAGGGAGAGGGCAAGGGTAAGAGCAGCAAAAGATAAGGGAAAAGATAGGGACAAGGAGAAAGAGAAAGAGAACGAGTCTGGCGTTGCACACCACCACCACCACCACCACAATGTGAACAACCCCAACCATATGTCTCACACTGCTTCCTTCACTGAGCTTCTCACTGGTGGAATTGGGAGCACAGTAACAGTTAACCCCACCACCACAGCAAGTCCTAACGGATCATCTGTTCATCAGATCCATGAGGGTCATGATGAGGCCAATCTATTCCACAAGGGAAGACAACAACAACATTGGTCTTCAACAGTGACGCCAATGGACTACTTCAGCCCAGGAGGCCTCTTGGTGGGACCTTCTTCATCATCTGCAAGAACTCAACACCAACACCAACACCAACATCAATCTTCTTCAGGACAGTTCCAATTGGGACATGCCCTTCCCATCTCACCATTCAGTGGAGAAAACCACTCGGATCAGCTGCAGCATTTTTCCTTCATGCCAGACCACCTTAACATGCCAGCTGTGGTCACTTCTTCTTCTTCTGCTTCTCAGCCCAGCGGGGGTGACAATTACAACCTCAACTTCAGCATCTCTTCGGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCTCCGTCCTTTTTGCCTCACCTCCAGAGGTTTCAACCTTTAGACGGATCATCCAATCTACCTTTCTTCATTGGAGCTCCTGCTCCTTCTTCTGCTCCTCCAACCATTGACAGCAACAACAATAACAACCACCACCACCTTCAGTTCTCTCCCGTCTTCGATGGCCGCTTGCAACTTTGCTATGGCGATGGAACGAGGCATTCTGACCACAAGGGCAAGGGAAAGAACTAA 1524 0.4961 MEEDEIQAQAVCKFPRVGNGRSDQYQEEEEEGDIRRRGIGGGGGGGGGGSDASTNHFQSSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLINAASDAISELPSLNNPFPDTPKQPSDEKRPTSGQRGGQPQAFDEVDGDTNFLQQSQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARVRAAKDKGKDRDKEKEKENESGVAHHHHHHHNVNNPNHMSHTASFTELLTGGIGSTVTVNPTTTASPNGSSVHQIHEGHDEANLFHKGRQQQHWSSTVTPMDYFSPGGLLVGPSSSSARTQHQHQHQHQSSSGQFQLGHALPISPFSGENHSDQLQHFSFMPDHLNMPAVVTSSSSASQPSGGDNYNLNFSISSGLAGFNRGTLQSNSPSFLPHLQRFQPLDGSSNLPFFIGAPAPSSAPPTIDSNNNNNHHHLQFSPVFDGRLQLCYGDGTRHSDHKGKGKN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00640 507 ProSiteProfiles TCP domain profile. 76 134 IPR017887 -
Phco11g00640 507 MobiDBLite consensus disorder prediction 171 210 - -
Phco11g00640 507 MobiDBLite consensus disorder prediction 1 64 - -
Phco11g00640 507 MobiDBLite consensus disorder prediction 133 264 - -
Phco11g00640 507 MobiDBLite consensus disorder prediction 22 37 - -
Phco11g00640 507 MobiDBLite consensus disorder prediction 336 362 - -
Phco11g00640 507 MobiDBLite consensus disorder prediction 336 378 - -
Phco11g00640 507 Pfam TCP family transcription factor 75 231 IPR017887 -
Phco11g00640 507 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 43 359 IPR005333 GO:0003700
Phco11g00640 507 MobiDBLite consensus disorder prediction 213 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00640 Phco-Chr11 4505814 4507337 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco11g00640 TCP 6.7e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00640 11 4505814 4507337 Phco11g00640 11 4505814 4507337 ECH