Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00536 ATGGCCGACGTCGTTTCCAAGACCCCTCCCCACACCACCCCCACGAGCCACCACAAGAAGGAGTCATCGAACCTTCTATTGGGTCGTTTCGAGATTGGGAAGCTCCTTGGTCATGGAACCTTCGCAAAGGTATACTACGCGCGGAACCTGAAAACCGGCGAAGGCGTGGCCATCAAGGTAATCGACAAGGAGAAGATTCTGAAGGGAGGTTTGGTGGCACACATAAAGCGCGAGATCTCCATCCTCCGCCGCGTGCGCCACCCCAACATCGTGCAACTCTTCGAAGTCATGGCCACCAAGAGCAAGATCTATTTCGTAATGGAATACGTTCGCGGGGGCGAGCTTTTCAACAAGGTCGCAAAAGGAAGGCTCAAAGAAGAGGTTGCCAGGAAGTACTTTCAGCAGTTAATCTCCGCGGTGGGGTTCTGCCACGCCAGAGGGGTGTACCATAGAGATCTCAAACCTGAAAATCTCTTACTTGATGAGAATGGTAATCTTAAGGTGTCTGATTTCGGGTTGAGTGCGGTTTCTGATCAAATCCGCCAGGATGGGTTGTTCCACACTTTTTGTGGGACACCTGCGTATGTTGCTCCCGAGGTTTTGGCGAGGAAAGGATACGATGGTGCTAAGGTGGATCTCTGGTCTTGTGGGGTTGTGTTGTTTGTGTTGATGGCGGGGTATTTGCCTTTTCACGACCAGAATGTTATGGCAATGTATAAGAAGATTTACAGAGGGGAGTTTCGGTGTCCCAGGTGGTTTTCTCCTGATTTGTCCAGGCTTCTCACGAAGCTTCTTGACACAAAGCCTGAAACCCGGATTGCGATTCCTGAGATTATGGAGAACAAGTGGTTCAAGAAAGGGTTCAAGCAGATCAAGTTTTATGTTGAGGATGATAGGCTTTGCAATGTGGATGATGAGGTGCTTTTGGACAATGATGACGATGTTGCTTCGGTTGCTTCTTTTTCGGATTACTCGATTTCGGAGTCTGATACGGAGGTTGATTTTAGGAGAAAGAATACTCCTTTGCCCAGACCTCCTAGTTTGAATGCTTTTGACATTATATCTTTTTCCCCTGGGTTTGATCTCTCTGGGTTGTTTGAGGAGAAGGAGGATGAGACCAGGTTTGTGACTGCTGCACCGGTTAACATGATTATTTCCAAGTTGGAGGAGATAGCCCAGTTGGTCAGGTTTACAGTAAGGAAGAAGGATTGCAGGGTGAGTTTGGAAGGTACCCGAGAGGGGGTGAAGGGGCCTTTGACTATTGCTGCTGAGATTTTTGAGTTGACACCTTCTTTGGTTGTGGTGGAGGTGAAGAAAAAGGGAGGGGATAGAGCTGAGTATGAGAGGTTTTGTAACAATGAATTGAAGCCTGGGCTGCAGAATTTGATGGTGGAAGAGTCTTCAACTTCTTCAGGCTTGTCTACACCTCAAACTTCCTTACTAGGTGGCCTTTCTGAATCTGTTCCGGACATTTCTTCTGAAATCGGAAGCCCATGCTATGTACCTTCTGATGAGTGA 1518 0.4802 MADVVSKTPPHTTPTSHHKKESSNLLLGRFEIGKLLGHGTFAKVYYARNLKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYRGEFRCPRWFSPDLSRLLTKLLDTKPETRIAIPEIMENKWFKKGFKQIKFYVEDDRLCNVDDEVLLDNDDDVASVASFSDYSISESDTEVDFRRKNTPLPRPPSLNAFDIISFSPGFDLSGLFEEKEDETRFVTAAPVNMIISKLEEIAQLVRFTVRKKDCRVSLEGTREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYERFCNNELKPGLQNLMVEESSTSSGLSTPQTSLLGGLSESVPDISSEIGSPCYVPSDE 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00536 505 Gene3D Transferase(Phosphotransferase) domain 1 20 335 - -
Phco11g00536 505 Pfam NAF domain 345 401 IPR004041 GO:0007165
Phco11g00536 505 CDD STKc_SnRK3 29 283 - -
Phco11g00536 505 Gene3D Kinase associated domain 1, KA1 343 464 - -
Phco11g00536 505 ProSiteProfiles Protein kinase domain profile. 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00536 505 SMART serkin_6 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00536 505 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Phco11g00536 505 MobiDBLite consensus disorder prediction 485 505 - -
Phco11g00536 505 SUPERFAMILY Protein kinase-like (PK-like) 26 285 IPR011009 -
Phco11g00536 505 FunFam Non-specific serine/threonine protein kinase 345 463 - -
Phco11g00536 505 MobiDBLite consensus disorder prediction 1 22 - -
Phco11g00536 505 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 457 - -
Phco11g00536 505 ProSiteProfiles NAF domain profile. 343 367 IPR018451 GO:0007165
Phco11g00536 505 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00536 505 CDD CIPK_C 349 460 - -
Phco11g00536 505 FunFam Non-specific serine/threonine protein kinase 20 327 - -
Phco11g00536 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Phco11g00536 505 FunFam Non-specific serine/threonine protein kinase 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00536 Phco-Chr11 3700753 3702270 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco11g00536 Pkinase 3.8e-73 CL0016