Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco11g00465 | ATGGGTAAAAGGAAGGCAAAGGCAAAACCTGCTCCAAAGAAACGAATGGATAAGCTTGATACTGTCTTCAGCTGCCCTTTCTGCAATCATGGCAGCAGTGTTGAATGCCGCATTGACATGAAGAACTTGATAGGGGAAGCTACATGCGGGATATGCCAAGAGAGCTTTAGCACTACCATCACAGCTTTATCAGAGGCAATAGACATATACAGTGAGTGGATTGATGAATGTGAAAGGGTGAACACTGTGGATGATGATGCTTAG | 264 | 0.4432 | MGKRKAKAKPAPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSTTITALSEAIDIYSEWIDECERVNTVDDDA | 87 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco11g00465 | 87 | Gene3D | - | 16 | 82 | IPR038567 | - | |
Phco11g00465 | 87 | PANTHER | UNCHARACTERIZED | 1 | 84 | IPR007808 | - | |
Phco11g00465 | 87 | Pfam | Transcription elongation factor Elf1 like | 2 | 78 | IPR007808 | - | |
Phco11g00465 | 87 | FunFam | Transcription elongation factor 1 homolog | 15 | 82 | - | - | |
Phco11g00465 | 87 | SUPERFAMILY | Zinc beta-ribbon | 1 | 81 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco11g00465 | Phco-Chr11 | 3166791 | 3167824 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phco11g00465 | Elf1 | 1.1e-30 | CL0167 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco11g00465 | 11 | 3166791 | 3167824 | Phco11g00465 | 11 | 3166791 | 3167824 | ECH | |
Phco11g00465 | 11 | 3166791 | 3167824 | Phco8g02608 | 8 | 37808129 | 37809078 | ECH |