Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00465 ATGGGTAAAAGGAAGGCAAAGGCAAAACCTGCTCCAAAGAAACGAATGGATAAGCTTGATACTGTCTTCAGCTGCCCTTTCTGCAATCATGGCAGCAGTGTTGAATGCCGCATTGACATGAAGAACTTGATAGGGGAAGCTACATGCGGGATATGCCAAGAGAGCTTTAGCACTACCATCACAGCTTTATCAGAGGCAATAGACATATACAGTGAGTGGATTGATGAATGTGAAAGGGTGAACACTGTGGATGATGATGCTTAG 264 0.4432 MGKRKAKAKPAPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSTTITALSEAIDIYSEWIDECERVNTVDDDA 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00465 87 Gene3D - 16 82 IPR038567 -
Phco11g00465 87 PANTHER UNCHARACTERIZED 1 84 IPR007808 -
Phco11g00465 87 Pfam Transcription elongation factor Elf1 like 2 78 IPR007808 -
Phco11g00465 87 FunFam Transcription elongation factor 1 homolog 15 82 - -
Phco11g00465 87 SUPERFAMILY Zinc beta-ribbon 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00465 Phco-Chr11 3166791 3167824 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco11g00465 Elf1 1.1e-30 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00465 11 3166791 3167824 Phco11g00465 11 3166791 3167824 ECH
Phco11g00465 11 3166791 3167824 Phco8g02608 8 37808129 37809078 ECH