Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00463 ATGAAGAAAATTTCCAAGAGCAGCTGCAAATCAGCATCACACAGGCTCTTTAAAGACAAGGCAAGGAACCATGTTGATGATCTACAGGTCATGTTCTTGGATCTTCAGTTTGCCAGAAAGGAGAGCCGCACGATTGATGTGGCACTCCTTGAGGAGCAAGTCCATCAAATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAGCCTTCTCCAGCTTCTTCTCTGCAGCAAGGAGGTAGTCTTGGTTCATTCTCGACCGATGTCTATAGGCTGTTGCAGCTCTGTGAGGAGGAAGATGATGCTACTAGTCCATTAGTTGCACCTAAGCCTGAACCTAATGATCAGACTATGCAGGCTGGAGCTAGGGTGATAGTCCAAGAGGGCCAACATGAACAAGAATTCCTATTACTTAAAGAATGCAAACACTCCGCTGTAGGAGTTCCCAACATGCCAGCTCACAACTTGGATGGATCTGCTTTAGAATTTCATCAATTTGAATTCAATAAGGACTTCGATCACAGCTTTTATGCTGGTACAGGATTTTGTGAGGAAGGTGGTGGTCCTCATATATCTAGCTATCTTCCAAGTGTGTGTCCTCCTCCTTCTGCTTTCTTAGGTCCAAAATGCGCACTTTGGGACTGTCCAAGACCTCTTCAAGGGTTGGATTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAATGAAGGACCACCAGGCATGACCCCAGTTCTAAGACCTGGGGGAATAGGACTCAAGGATAATTTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGTTGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAATGCACCTGAACTCTTTGATATTTGTGTTCTGGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTAGAAGGGCATTTGAGAGTGGGAACAGAAAGCAGAGGTCACTGCCGGATTATAGCGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTACATGGACCCTCAACCTCTAAACCTTTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAGTGTGATGCATGTGCCTTATATCGGTTAGAACTGAAGCTTGTTGATGGGAAAAAGAGCTCAAAGGCAAGGATAATAACAGGTGATTCGGTTGCTGATCTGCAGAAGCACATGGGAAGCCTCTCTGCGGAGTTTCACTCTGATAGTAACAAACGGTCTGCCAAAGGTAGTAGAACCAAGCTTGGCATAGGAGGTGGTGTTTATTCAGCTTCTAACAGAGTCGCTCTACTAAATGCACCTTATCAATACGGCTTAACTGCACCATATGACTTTGTTGCTGACAACACAAGTGACTATATGAACAACAAGACAAGGTGTTTTTTTTTCCTTGTCAAGACACTGTGA 1461 0.4463 MKKISKSSCKSASHRLFKDKARNHVDDLQVMFLDLQFARKESRTIDVALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVYRLLQLCEEEDDATSPLVAPKPEPNDQTMQAGARVIVQEGQHEQEFLLLKECKHSAVGVPNMPAHNLDGSALEFHQFEFNKDFDHSFYAGTGFCEEGGGPHISSYLPSVCPPPSAFLGPKCALWDCPRPLQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFSALSAKAQGKVVGIPECEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISKCDACALYRLELKLVDGKKSSKARIITGDSVADLQKHMGSLSAEFHSDSNKRSAKGSRTKLGIGGGVYSASNRVALLNAPYQYGLTAPYDFVADNTSDYMNNKTRCFFFLVKTL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00463 486 PANTHER TRANSCRIPTION FACTOR VOZ1 1 469 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00463 Phco-Chr11 3159364 3161779 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Phco11g00463 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00463 11 3159364 3161779 Phco11g00463 11 3159364 3161779 ECH
Phco11g00463 11 3159364 3161779 Phco8g02606 8 37798304 37802662 ECH