Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00451 ATGAACCATGTGGAGCATATCGCTTATGACATGGTCATGATCACTCTATCCATATCTCTGATCGTTCTTGGCATCATCCTCTTTCTCGCTTGCAAGAAGAAACCTGTTGAATCCGAAGAAACACTTCCCGTGAAGTTGTGTGCTCGTGCATACCCCTTGATGGAAGTTGATGCCGCCACCGATGGCTTCAACCATAGGAGAATCATTGGCCAGGGTCGCTTAGGAACTGTGTATGCAGGGACACTAGAGAAAGAAGAGCTTGTAGCTGTTAAAAGGATTCACCCGGTTCTTGTGTTGAGCAATGCAGGGTTTGGTTTCTCATCCGTGTTGAAATGGCTCTCCTTGGCCCAACACCCCAACGTAGTTCCAATCATAGGGTTCTCAGAAGCACCTGGTGAGAGAGTTATTTTGATGGAGTTTGTGCACATGGCAAGCTTGGACTTCTACTTGCATCAAAACCAAGATGGGGCTTCACTTTTGGATTGGAACAAGAGGTTCAGGATTGCAGCTGGAGCAGCTAGAGGGCTTCAATACCTGCATGAAGTGGTGGCGCCAAACATTGTACATGGGTGTGTTAAGTCCTCTAATATTCTCATTGATGTCAACTTCTGTGCTAGGATTTCTGATTACGGGCTTGACTTTTTGGCACCCGTGGAAAAGAGAGGGCTAGTGGGGTATGTGGATGATGAATATTGGAGTGAAAGAAGGGGTGGTGGAGCTACCAAGGAGAGTGATGTTTATGGATTAGGGGTGATCCTGCTGGAGCTTTTAACTGGGAAAGGGTGTGAGGGAGGGTTGTTGGTGAAGTGGGCATTGCCTTTGATTAGAGAAACAAGTTTTAGTGAACTTTTGGATCCTAGGTTGGTGATTCCTTCGGACACGAAGCCTCTGGTTAGATTAGCCAAAGTTGCTTCAGCATGTGTTGGTAACTCACAAAAATGTAGACCTTCTGTGGCTCAAGTGGCAACCATTTTGAACAATTTAGAAACTGAAGTGTGCCTCTGA 1005 0.4617 MNHVEHIAYDMVMITLSISLIVLGIILFLACKKKPVESEETLPVKLCARAYPLMEVDAATDGFNHRRIIGQGRLGTVYAGTLEKEELVAVKRIHPVLVLSNAGFGFSSVLKWLSLAQHPNVVPIIGFSEAPGERVILMEFVHMASLDFYLHQNQDGASLLDWNKRFRIAAGAARGLQYLHEVVAPNIVHGCVKSSNILIDVNFCARISDYGLDFLAPVEKRGLVGYVDDEYWSERRGGGATKESDVYGLGVILLELLTGKGCEGGLLVKWALPLIRETSFSELLDPRLVIPSDTKPLVRLAKVASACVGNSQKCRPSVAQVATILNNLETEVCL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00451 334 ProSiteProfiles Protein kinase domain profile. 63 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00451 334 Pfam Protein tyrosine and serine/threonine kinase 66 323 IPR001245 GO:0004672|GO:0006468
Phco11g00451 334 Gene3D Transferase(Phosphotransferase) domain 1 142 332 - -
Phco11g00451 334 FunFam Receptor protein kinase CRINKLY4 141 332 - -
Phco11g00451 334 FunFam serine/threonine-protein kinase-like protein ACR4 30 140 - -
Phco11g00451 334 Gene3D Phosphorylase Kinase; domain 1 29 140 - -
Phco11g00451 334 PIRSF ILK 29 333 - -
Phco11g00451 334 SUPERFAMILY Protein kinase-like (PK-like) 40 325 IPR011009 -
Phco11g00451 334 PANTHER OS01G0253100 PROTEIN 46 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00451 Phco-Chr11 3076517 3077521 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Phco11g00451 PK_Tyr_Ser-Thr 2e-25 CL0016