Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00417 ATGGTTCATCCAATCCCATGTTTTCATACATTCTCAAGGCCTGTGCTTCTTCATGCTAAAACCATGATCAGACACAAGCAGAAACACACATGCCCTCTTCCACTACTTCTATTGATTTTTCTCTTTTTCAACTACACATGTGCCATTGATTTCGTCTTCAACGGCTTCAACTCCTCTGAAGTGTTGCTCTTCGGAAACGCCACCATCGATTCTCGAATTCTAACACTAACACATGATCAAACTTTCTCCATCGGTCGTGCCTTGTACAGGGAAAAAATTCCCACCAAGAGACCAAACTCTTCTTTTGTGTATCCTTTCTCCACCTCTTTCATCTTTGCCATGGCACCTTATGAAAACACTCTTCCAGGGCATGGCTTGGTTTTCATCTTTACACCTGTCACGGGTATCCAAGGCACAAGTTCTGCTCAACACCTTGGTCTTTTCAACCTCACCAACAACGGAAACTCAAGCAACCATGTGCTTGGTGTTGAGTTCGACGTGTTCATGAACCAAGAGTTCGATGACTTAAACGCCAATCATGTGGGGATTGACATAAACTCTCTCAAGTCTTTTGTTTCCAATGATTCTGGGTATTGGCAAGATGATGGTGACAAGTCCTTTAAGGAATTGACGCTTAACAACGGTGAGAATTACCAAGTTTGGATTGACTATGAAGATTCTTGGATGAATGTTACCATAGCACCGGTTGGTAGGAAAAGGCCTAGTAGGCCTTTGTTGAATGTTTCTCTCAACTTATCTCAGGTTTTTGAGGATGAAATGTTCGTTGGGTTTACCAGTGCCACTGGTCAATTAGTTCAGAGTCACAAGATTTTGGGGTGGAGTTTCAGCAATGATAATATTTCGTTAAGTGATGAACTCATTACTACTGGGTTACCATCTTTTGTTCTTCCAAAGGATTCAATTTTTAAGTCCAAGGGGTTTGTTGCAGGGTTTACTGTTGGAGTTTTCTTAGTTATTTGTGTCTTGGTATTGTTGGCACAGATTTTGATTCAGTGGAAGCGTAGGAGAGAAAGGAAGAGGCAGGAAATGGAAGATTGGGAGTTGGAGTATTGGCCACACAGAATGGTGTATGAAGAAATTGAGGCAGCAACAAAGGGGTTCTCTGAGGAGAATGTGATTGGGGTTGGTGGGAATGGGAAAGTCTACAAGGGTGTTCTAAGAGGAGGGGTGGAGATTGCTGTGAAGCGCATTTCTCATGAAAATGATGGCGTGCGAGAATTTCTTGCTGAAGTTTCAAGCCTTGGGAGACTGAAGCAAAGGAATTTGGTGGGGTTGAGAGGTTGGGGCAAGAAAGATGTTGGGAGTTTCTTCTTAGTCTATGACTACATGGAAAACGGTAGCTTGGACAAGAGGGTGTTTGATTGTGATGAGAGGAAGATGTTGAGTTATGAAGACAGGATAAGGATCATCAAAGATGTGGCTTTTGCAGTTTTGTACTTGCATGAGGGGTGGGAAGCTAAGGTTGTGCACAGGGACATCAAGGCCAGCAATGTTTTGCTTGATAAGGATATGAATGGAAAGCTTGGGGATTTTGGGTTAGCCAGAATGCACGGCCATGGTCAAGTTGCTAGCACCACCAAATTGGTTGGAACAGTGGGGTACCTGGCTCCCGAAATGTTCAAGACGGGAAGAGCTTCCACTCAGACAGATGTTTACATGTATGGTATCTTGATTTTAGAGGTTTTGTGTGGAAGGAGACCTCTAGAAGAAGGTAAGGTACCTTTGGTGGAGTGGGTTTGGCAACTAATGGTACAAGGGCAAATTGTTTTTGTACTTGATGAAAGATTAAGGGCCAAGGGAGAGTTCAGTGAGCAAGAGGTGGAGAGGTTAATGCACTTGGGTTTGTTGTGTGCCTACCCTGAACCAAAGGCCAGGCCCACAATGAGACAAGTGGTGAATGTTCTAGAGGGGAAGAAAGAGGTCGATGATTCAGAAATTGAGAATATGGATAGTTATTTGCTCCAACAGTTGAAATCAAGGGATATATTGTCTGAGTATTCCCAATACTTTAGCTATGCCTCGCACCCAACTTTTAAAGATATTCGTAACTCTTCTTCAATATCTCTTACTTGGTCCGAATCTGTAATTGATGGTAGGTGA 2121 0.4305 MVHPIPCFHTFSRPVLLHAKTMIRHKQKHTCPLPLLLLIFLFFNYTCAIDFVFNGFNSSEVLLFGNATIDSRILTLTHDQTFSIGRALYREKIPTKRPNSSFVYPFSTSFIFAMAPYENTLPGHGLVFIFTPVTGIQGTSSAQHLGLFNLTNNGNSSNHVLGVEFDVFMNQEFDDLNANHVGIDINSLKSFVSNDSGYWQDDGDKSFKELTLNNGENYQVWIDYEDSWMNVTIAPVGRKRPSRPLLNVSLNLSQVFEDEMFVGFTSATGQLVQSHKILGWSFSNDNISLSDELITTGLPSFVLPKDSIFKSKGFVAGFTVGVFLVICVLVLLAQILIQWKRRRERKRQEMEDWELEYWPHRMVYEEIEAATKGFSEENVIGVGGNGKVYKGVLRGGVEIAVKRISHENDGVREFLAEVSSLGRLKQRNLVGLRGWGKKDVGSFFLVYDYMENGSLDKRVFDCDERKMLSYEDRIRIIKDVAFAVLYLHEGWEAKVVHRDIKASNVLLDKDMNGKLGDFGLARMHGHGQVASTTKLVGTVGYLAPEMFKTGRASTQTDVYMYGILILEVLCGRRPLEEGKVPLVEWVWQLMVQGQIVFVLDERLRAKGEFSEQEVERLMHLGLLCAYPEPKARPTMRQVVNVLEGKKEVDDSEIENMDSYLLQQLKSRDILSEYSQYFSYASHPTFKDIRNSSSISLTWSESVIDGR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00417 706 ProSiteProfiles Protein kinase domain profile. 374 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00417 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Phco11g00417 706 Coils Coil 336 356 - -
Phco11g00417 706 SMART serkin_6 374 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00417 706 CDD lectin_legume_LecRK_Arcelin_ConA 49 283 IPR001220 GO:0030246
Phco11g00417 706 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Phco11g00417 706 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 336 449 - -
Phco11g00417 706 FunFam L-type lectin-domain containing receptor kinase S.4 450 655 - -
Phco11g00417 706 PANTHER - 65 646 - -
Phco11g00417 706 Gene3D - 47 292 - -
Phco11g00417 706 SUPERFAMILY Protein kinase-like (PK-like) 350 643 IPR011009 -
Phco11g00417 706 Gene3D Transferase(Phosphotransferase) domain 1 450 666 - -
Phco11g00417 706 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 292 IPR013320 -
Phco11g00417 706 FunFam L-type lectin-domain containing receptor kinase S.4 47 290 - -
Phco11g00417 706 Pfam Legume lectin domain 49 287 IPR001220 GO:0030246
Phco11g00417 706 Pfam Protein kinase domain 375 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00417 706 Gene3D Phosphorylase Kinase; domain 1 335 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00417 Phco-Chr11 2738096 2740318 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco11g00417 Pkinase 1.8e-41 CL0016