Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00374 ATGAATAGCATGGGTTCATCTTCAGAATATCACACTAATCAGCACCCTCATCTTCCTCCGGGGTTTCGGTTCCACCCCACAGATGAAGAACTAGTGGTTCACTACCTCAAGAGAAAAGCAGACTCTGTTCCTCTTCCCGTTGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCGTGGGAACTCCCAAGTAAAGCAACGTTTGGCGAGCAAGAGTGGTACTTTTTCAGCCCAAGGGACAGAAAATACCCAAATGGGGCAAGGCCTAACAGGGCTGCTTCTTCTGGGTATTGGAAAGCTACCGGAACTGACAGGCCGATTCTTGCATCTCATGGCCACCACAAAGTAGGAGTCAAGAAAGCACTTGTCTTCTACGGTGGCAAGCCTCCAAAAGGGGTTAAAACCAATTGGATCATGCACGAGTACAGGCTTGTTGGCAGTTCCTCAAATTCTACCTCAAAACCACCTTCTCTGCCTGCAGGCCATGCACGTAGTAGCAAGAAAAACTCCTTGAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAACAACAGTACCATCATGCCAAGGTTTCCTTTGATGGAGCAGAATAAGGAGCTTTCTACGGAGAGTACTATGCTACCAATGATGTCAACTTTGTCAATGGCCAATAATAACACAACTCAGAATTCCAAAGCCGGGACTTCGACAAGCGCAAGTTATGGAGCCCTGGGACTAGAAAATGATGACAACTTCTTTGATGGAATCTTAGGAGTTGACCATAGCATACAGCAAGATGTTTCTAATTCCCACCAAGTCTCTTCAAAGGGAATCTACCCTGTGAAACGAGACCTCTCGTCACAGTTTTGGAATGACACAGGGTCATCTTCTAGCAGAAGATTCCATTGTGATCTCAATGCAGGAAGCAAGACTGTTGATGAAGACAATTCCTTCGTTTCACTGCTTAGCCACCTTCCACAGAACACAGGGCTTCACCCAAATGCACTTCTTGGCCCAGTTAGTAATGATGTATTGAGGCAACAGTTTCAACTTCCAAGCATGAACTGGAACGTTTAG 1065 0.4592 MNSMGSSSEYHTNQHPHLPPGFRFHPTDEELVVHYLKRKADSVPLPVAIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAASSGYWKATGTDRPILASHGHHKVGVKKALVFYGGKPPKGVKTNWIMHEYRLVGSSSNSTSKPPSLPAGHARSSKKNSLRLDDWVLCRIYKKNNSTIMPRFPLMEQNKELSTESTMLPMMSTLSMANNNTTQNSKAGTSTSASYGALGLENDDNFFDGILGVDHSIQQDVSNSHQVSSKGIYPVKRDLSSQFWNDTGSSSSRRFHCDLNAGSKTVDEDNSFVSLLSHLPQNTGLHPNALLGPVSNDVLRQQFQLPSMNWNV 354
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00374 354 Gene3D NAC domain 27 190 IPR036093 GO:0003677|GO:0006355
Phco11g00374 354 MobiDBLite consensus disorder prediction 148 167 - -
Phco11g00374 354 SUPERFAMILY NAC domain 12 185 IPR036093 GO:0003677|GO:0006355
Phco11g00374 354 MobiDBLite consensus disorder prediction 1 22 - -
Phco11g00374 354 FunFam NAC transcription factor 56 27 190 - -
Phco11g00374 354 ProSiteProfiles NAC domain profile. 18 185 IPR003441 GO:0003677|GO:0006355
Phco11g00374 354 PANTHER NAC TRANSCRIPTION FACTOR 56 18 218 - -
Phco11g00374 354 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco11g00374 Phco-Chr11 2428668 2430217 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco11g00374 NAM 2.5e-39 No_clan