Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00315 ATGGATTTCTCAACTCTAACACTTGTTTTTATCGTAGTTTGCTACTTTTGTCACTGCTTGAGTACTGCCAATGATACCATTACATCTGGCCAATTCTTCAGAGATCCTCAAACTCTGATCTCAGCTAACGGAGTCTTCAAGTTAGGATTCTTCAGCCCTCAAAATTCATCATTTCGCTACCTGGGAATCTGGTATCTCTCTGACTCCAATGTCATGTGGGTAGCTAACAGAAACCAGCCACTGTCGAACAACTCTTCTGGGCTTGTTCAAATTTCTGTACATGGCAATCTTGTGGTGTTAGATAGCAACAAAAGGGTCGTTTGGTCATCAAATGTGACACACATTGCAACCAATTCAACCGCCAAACTTTTAGAAACAGGAAATCTCGTCCTGATAGATAGTGTCACGGGACAAAGTATATGGGAGAGTTTCCAACATCCCAGTCACGCTCTCGTGCCAAGCATGAAATTTGGTACTAACAAAAGAACAGGTGAGAAAGTACGAATAACATCGTGGAGAAGTCCTTCTGATCCTTCTGTTGGGTACTATTCGGCTACTCTTGAACACCCCAACACCCCAGAAATGTTTTTCTGGTTGAATGAAACGCAACCGTATCATCGTTCTGGTCCATGGAATAATCAGATTTTTATTGGCTCGCCCGAGATGTCACCTGGTTATCTAAATGGATGGAGTATGATGACTGACGTAGAAGACGAAACTGTTTATCTTTCTTATAATTTGCCAAATCAATCTTACTTTGGAATCATGACCTTGAATCCACAGGGTCAGATTGTATGCTCATGGTGGAACAACGAAAAGTTAGTTCAGAAGATGACGATGCAGAGAACTGTCTGCGATCTTTATGGCTATTGTGGGGCATTTGCAACCTGTAATCTTCAGAGTTCACCAATATGCAGCTGTTTGAGTGGATATGGGCCCAAAAATGTAGAGGAGTGGAATAGAAAAAATTGGACTAGTGGGTGTGTAAGGAGTGAGCCACTGCATTGTGGGGAACGCACTAATGCAAGTGAAGTCAGCAAAGATGTGTTTTTGAAGCTTGAGAATATGAAAGTGCCAGACTTTGTACATAGGTCAGATTCTTTGGAAGATGAATGCAAAGCGGAGTGTTTGGAGAATTGCTCTTGTGTGGCCTTCGCATATGACAGAGGCATTGGATGCATGGTTTGGAGTGGAGACTTGATTGACATACAGAAGTTCTCAAGTGGAGGGGTTGATCTTTACATTCGCGAGCCACCTTCAGAAATCGAAAAACATTCAGATACAAGAAGAAAAAGGAGATTTATAATCCCAGTTGGAGTTGGAGTACCTATAGGAATGCTTATCTTGGCCGGCTGCCTTTATCTCTCATGGAAATGCACTGATAAATCCACAGGAAAAATATATTCCCAAAGGCAAGGAAGGAATCAGAAACAGGTAAAATTGAATGATGAGTTACCGCTTTTCAGTTTTGAAGAACTTGTAAATGCTACACACAATTTTCACTCGGCCAACGAGTTAGGTAAAGGAGGCTTTGGTTCAGTATATAAGGGACAACTGAAAGAAGGAGCCCAAATAGCAGTGAAAAGACTTTCAGAAACTTCTGGACAAGGACTAGAAGAATGCATGAATGAGGTATTAGTGATTTCAAAGCTTCAACATCGCAATCTTGTCAAACTTCTTGGCTGCTGTATTGAACAGGAGGAGAAAATGTTGGTATACGAGTACATGCCTAACAAGAGTTTGGATGTAATATTATTTGATCCAGTAAAAAAGAAAGATCTAGATTGGCCAAAACGCTTCAATATAATTGAAGGAATCTCTCGAGGTTTGCTTTATCTCCATAGAGATTCTAGACTAAAAATTGTGCACAGAGATTTGAAAGTTAGTAACATCTTGTTGGATGAAGAGCTGAATCCAAAGATATCAGACTTTGGTATGGCCAGAATTTTTGGGGGCAATGATATGCAGACCAATACTAGAAGGGTTGTTGGGACATTTGGTTATATGTCTCCAGAATATGTATTCAGAGGGTTGGTTTCTGAGAAATTAGATGTGTTCAGCTTTGGAGTGTTGTTGCTAGAAATCATTAGTGGAAGAAAAATCAGCAGCTATTTCGGTTGTGACCAATCATTGAGTCTCTTGGGATTTGCTTGGAAATTATGGAATGAAAAGGACATCCAATCCCTGATAGATCCAGAAACATGTGATCCAAATAATGTAAATGACATAGTGAGATGCGTGCACATCGGACTTCTTTGTTTGCAAAATCTTGCAAAAGACAGGCCAAGTATGGCTACTGTAGTTTCAATGCTCAATAGTGAGATTCTTAATCTTCCTTGCCCTTCACATCCTGCATTCGTGGAAAGGCAAATTGCATCTAGTGCAGAGTCATTTCTACAGAACAACATAACACACTCCATCAACAATGTTACTGTCACAGTCATGATGCAAGGTAGATAG 2460 0.4045 MDFSTLTLVFIVVCYFCHCLSTANDTITSGQFFRDPQTLISANGVFKLGFFSPQNSSFRYLGIWYLSDSNVMWVANRNQPLSNNSSGLVQISVHGNLVVLDSNKRVVWSSNVTHIATNSTAKLLETGNLVLIDSVTGQSIWESFQHPSHALVPSMKFGTNKRTGEKVRITSWRSPSDPSVGYYSATLEHPNTPEMFFWLNETQPYHRSGPWNNQIFIGSPEMSPGYLNGWSMMTDVEDETVYLSYNLPNQSYFGIMTLNPQGQIVCSWWNNEKLVQKMTMQRTVCDLYGYCGAFATCNLQSSPICSCLSGYGPKNVEEWNRKNWTSGCVRSEPLHCGERTNASEVSKDVFLKLENMKVPDFVHRSDSLEDECKAECLENCSCVAFAYDRGIGCMVWSGDLIDIQKFSSGGVDLYIREPPSEIEKHSDTRRKRRFIIPVGVGVPIGMLILAGCLYLSWKCTDKSTGKIYSQRQGRNQKQVKLNDELPLFSFEELVNATHNFHSANELGKGGFGSVYKGQLKEGAQIAVKRLSETSGQGLEECMNEVLVISKLQHRNLVKLLGCCIEQEEKMLVYEYMPNKSLDVILFDPVKKKDLDWPKRFNIIEGISRGLLYLHRDSRLKIVHRDLKVSNILLDEELNPKISDFGMARIFGGNDMQTNTRRVVGTFGYMSPEYVFRGLVSEKLDVFSFGVLLLEIISGRKISSYFGCDQSLSLLGFAWKLWNEKDIQSLIDPETCDPNNVNDIVRCVHIGLLCLQNLAKDRPSMATVVSMLNSEILNLPCPSHPAFVERQIASSAESFLQNNITHSINNVTVTVMMQGR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00315 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 781 - -
Phco11g00315 819 CDD B_lectin 37 147 IPR001480 -
Phco11g00315 819 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Phco11g00315 819 Pfam PAN-like domain 345 403 IPR003609 -
Phco11g00315 819 SMART blect_4 30 147 IPR001480 -
Phco11g00315 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 213 IPR036426 -
Phco11g00315 819 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Phco11g00315 819 Pfam D-mannose binding lectin 71 173 IPR001480 -
Phco11g00315 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 144 - -
Phco11g00315 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Phco11g00315 819 SUPERFAMILY Protein kinase-like (PK-like) 483 794 IPR011009 -
Phco11g00315 819 CDD STKc_IRAK 506 772 - -
Phco11g00315 819 CDD PAN_AP_plant 333 418 - -
Phco11g00315 819 ProSiteProfiles Protein kinase domain profile. 500 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00315 819 SMART serkin_6 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00315 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Phco11g00315 819 SMART ntp_6 345 417 IPR003609 -
Phco11g00315 819 Pfam Protein tyrosine and serine/threonine kinase 503 771 IPR001245 GO:0004672|GO:0006468
Phco11g00315 819 Gene3D Transferase(Phosphotransferase) domain 1 576 777 - -
Phco11g00315 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 575 - -
Phco11g00315 819 Gene3D - 18 145 IPR036426 -
Phco11g00315 819 Gene3D Phosphorylase Kinase; domain 1 461 575 - -
Phco11g00315 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 762 - -
Phco11g00315 819 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Phco11g00315 819 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00315 Phco-Chr11 2039991 2043473 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco11g00315 PK_Tyr_Ser-Thr 4e-46 CL0016