Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00310 ATGATTATTATTACCAACCAAGTGACAGGGGAGAAAGTCAAAGTGACTTCATGGAAAAACCCTTCTGATCCAGCCGTTGGAATCTTCTCGGGCAGCCTTCAACGTCTAAGTGTTCCTGAAGTGTTTGTCTGGAATCAAACACAGCCGTATTGGCGCTCAGGTGAGTGGAATGGTCAGGTTTTTATTGGTCTGGCAAGGATGTATACTACTGCTTATCTGAATGGATTCAGTGTAAGGGAAGATAATGGAACTGATCCAATATGCAGCTGTTTGAGAGGCTTTGAGCCGAAAAACCGCGATGAATGGGATAAGCAAAACTGGACAAGTGGATGTGTGAGAAGGGAAGCACTGAAATGTGAGAGGAGCGAAGCCAGCATAGGAGATGGGTTTGTGAAATTGCAGATGTCTAAGGTGCCAGATTTTGCACTCCAATCATCTGTTTCTGTTGATACATGCAGAACAGAGTGCCTGAATAAATGCTCCTGTACAGCATATGCATGTGATGCTGGCATTGGCTGTATGTCCTGGGGCGAGTTAATTGACATAGTAAGATGCTTGATGATAGTGGTTATGAAAATCACTTTGGTTCAGGAAAGTGGAAACTCTCCAGAGAATGATGAGCAACATGATGATGTTGATGATCAGCAACTTCGAGAAGATTTTGATGTTCCTATTGATGACGTTGACGAGGAACATGGGATGTCACAAGATGAAGATCTTAGTGATGCTTCTGAACCACCTCAAGTTCAAATTCGGAGGTCTAATAGGCAGAGGGAACCATCTACCAGAACAGAGTGCCTGAATAAATGCTCCTGTACAGCATATGCATGTGATGCTGGCATTGGCTGTATGTCCTGGGGCGAGTTAATTGACATAGTAAGGTTCTCGACTCGAGTGGAGGAGTTGATCTTTACACCCGCCAAGCTCCTTCAGAACTCAGTAACAAGAACGGAAAGACAACCATCGATGGTGCTGAGCACAGGGGAAAGCCATCCAGAAAACCGAAGTGCAGGTCTTAGTGGACAGCTGAAACAAGTTAACATCGAGGACGTGCCGGTATTTAATTTTGAAAACATAGCAACTTCAACAAATCACTTCAATTTAGCTAATAAGCTTGGCCAAGGTGGTTTTGGTGCGGTGTACAAGGGAGAATTACAAAATGGGCAAGAAGTAGCAGTAAAAAGACTTCCAAGAGCATCTAGGCAGGGGACAGAAGAATTTATGAATGAAGTGACAGTAATTTCAAAACTTCAGCACCGTAATCTTGTAAGACTCCTAGGTTGCTGTATTGAAGGAGGGGAGAAGATGTTGATCTTTGAATACATGCCTAATAAGAGTTTGGACTTTTATCTGTTTGATTCAGCTAAAAAGTCAGTTCTAGATTGGCAGAAAAGATTTAATATAATTGAAGGAATCTCACGTGGTTTGCTTTATCTCCATAGAGATTCTAGATTAAGACCTGAAGCCAACATTTATTTGCCTTTTTTGTTTGTTGAGGCATGGAAACTATGGAATGAAGAGGAGATTGAATCTCTGATTGATCCAGAAATATTTAACACAGACTCTGTCAATCACACATTGAGATGCATACACATTGGACTTCTATGTGTGCAAGAATTAGCAAAGGAGAGGCCTACTATGGCCACTGTGGTGTCAATGCTAAATGGTGATATTGTTAATTTTGCTCCTCCGCGGCAACCTGCGTTCATCCAAAGACAAATTGAGTTCAGAGGAGAATCGTCTCAGCAGAGTCACGAATCAAATTCCATCAACAATGTCACTGTCACAAACTTGCAAGGCAGATAA 1806 0.4219 MIIITNQVTGEKVKVTSWKNPSDPAVGIFSGSLQRLSVPEVFVWNQTQPYWRSGEWNGQVFIGLARMYTTAYLNGFSVREDNGTDPICSCLRGFEPKNRDEWDKQNWTSGCVRREALKCERSEASIGDGFVKLQMSKVPDFALQSSVSVDTCRTECLNKCSCTAYACDAGIGCMSWGELIDIVRCLMIVVMKITLVQESGNSPENDEQHDDVDDQQLREDFDVPIDDVDEEHGMSQDEDLSDASEPPQVQIRRSNRQREPSTRTECLNKCSCTAYACDAGIGCMSWGELIDIVRFSTRVEELIFTPAKLLQNSVTRTERQPSMVLSTGESHPENRSAGLSGQLKQVNIEDVPVFNFENIATSTNHFNLANKLGQGGFGAVYKGELQNGQEVAVKRLPRASRQGTEEFMNEVTVISKLQHRNLVRLLGCCIEGGEKMLIFEYMPNKSLDFYLFDSAKKSVLDWQKRFNIIEGISRGLLYLHRDSRLRPEANIYLPFLFVEAWKLWNEEEIESLIDPEIFNTDSVNHTLRCIHIGLLCVQELAKERPTMATVVSMLNGDIVNFAPPRQPAFIQRQIEFRGESSQQSHESNSINNVTVTNLQGR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00310 601 Gene3D Transferase(Phosphotransferase) domain 1 349 560 - -
Phco11g00310 601 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Phco11g00310 601 SUPERFAMILY Protein kinase-like (PK-like) 351 580 IPR011009 -
Phco11g00310 601 MobiDBLite consensus disorder prediction 241 255 - -
Phco11g00310 601 FunFam receptor-like serine/threonine-protein kinase SD1-8 340 441 - -
Phco11g00310 601 Pfam Protein tyrosine and serine/threonine kinase 367 482 IPR001245 GO:0004672|GO:0006468
Phco11g00310 601 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 498 581 - -
Phco11g00310 601 CDD PAN_AP_plant 117 183 - -
Phco11g00310 601 ProSiteProfiles PAN/Apple domain profile. 119 185 IPR003609 -
Phco11g00310 601 ProSiteProfiles Protein kinase domain profile. 366 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00310 601 MobiDBLite consensus disorder prediction 232 260 - -
Phco11g00310 601 MobiDBLite consensus disorder prediction 579 601 - -
Phco11g00310 601 Pfam PAN-like domain 125 181 IPR003609 -
Phco11g00310 601 Pfam PAN-like domain 257 291 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00310 Phco-Chr11 2008508 2017097 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco11g00310 PK_Tyr_Ser-Thr 3.1e-23 CL0016