Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00307 ATGACGGAAAATGCAAGTGCAGCTTTGTGCCATTTGAAATTGGCTGCTGAACATGACCAAGAGGAGATGAGACGGAACAAACTTGATATCATTATTTTTGCTTTTGCTTTTATATTAATCCTTCAGAATACGTCTCATGCAGACCATGCCTTGACTCCAACATCTTCCATTGCAGATGGCCAAGAACTCATTTCTGCTGGACAGAACTTTTCTCTTGGATTCTTCACTCCAGGAACATCTAAGAGCCGCTACATAGGGATATGGTACAAGAATATTACGCCTCAAACCATAGTTTGGGTAGCAAACAGAGATAACCCACTTAATGATTCGAGAGGAAATTTAACCATCGCTGCTGATGGTAATATTGTACTTTTTGATGGAGCAGGTAACAGAATATGGTTTACAAATTCATCAAGTTCAATCGAAGAACCAATTGCAAAGCTGTTGGATTCTGGAAACTTTGTGTTGATGGATGGAAAGAAGAGTGATTCTGATGGTTACATATGGCAAAGCTTTGATAATCCAACAGACACAATGTTACCTGGGTTGATGTTGGGTTGGGATAAGAACTTAGGTATCAACAGATATTTGACTTCTTGGAAGAGTGATAATGATCCTTCTCCTGGAAACTTTACCTTCAGATTTGACCAGACAGAATTTCCTGAGTTAGTAATCCGCCGGGGAATGAACATTACATTCAGAAGTGGAATTTGGGATGGCACCCGTTTTAATTCAGATGATTGGTTGTCATTTATTGGAATTACAGCCTTCAAGCCTCAACTTTCAGTAACTAGCACTGTGGCAGTTTATTGGGATGAACCTGGAGATAGATTGTCAAGATTTGTGATGAAGGACGATGGACTACTTCAAAGATATATCTGGGACAACAAAAATTTTAAGTGGACTCTGATGCATGAGGCAAGAAAAGACTTTTGTGATAACTATGGAGCATGTGGGGTGAACGGTATTTGCAATATTAAGGATGTGCCTGCTTACTGCGATTGCTTGAAAGGGTTTATACCAAATTCACCGGAAGAATGGGATTCATTTAATTGGTCTGGTGGGTGCATCAGGAGAACACCCTTAAACTGTACACAAGGTGATAGGTTTCAGAAACTAAGCTGGGTTAAACTACCCATGTTGTTGCAATTTTGGACTAATAAAAGCAAGAATCTTGAAGAATGCAAGGTGGAGTGCTTGAAGAACTGTTCCTGCACGGCGTACGCAAATTCAGCCTTGAATGAAGGGCCTCATGGGTGCTTGCTTTGGTTTGGAGACTTGACTGACATTCGGCATCTTATAAATGAAGAGGGTGTACAACTTGATCTTTATGTAAGGTTAGCCGCTTCAGAAATAGAGTCCACTGCTAATGCAAGTAAAAGGAGATACATTGCTCTGATTATTTCGGTACCTGTGGCACTGCTGCTTTGTTGTATCATTTTCTACCTTTCTAAGAAGTATATAAAACGGAGGACAAGCACTGGTTTGGTCACAGGTCACAGAAACCATAATGAAGATCAAGTGATATCGCCTATTTTTGATATAAATACTATTTTGACTGCTACAGACAATTTTTCTATTGAGAACAAGATCGGGGAAGGTGGTTTTGGCCCAGTATACAGGGGTAAATTGGCTAACGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACCTCAAAACAAGGCATCTCAGAGTTTATGAATGAAGTTGGATTGGTGGCCAAACTCCAACATCGTAATCTCGTGAGTGTTTTGGGAGGGTGCACTCAAAGAGAGGAAAGAATGCTGATCTATGAATACATGCCAAATAGTAGCTTAGACCACTTCATTTTTGATCCAATACAAGGAAAATTTTTGAACTGGAGGAAACGATATGAAATTATTGTTGGAATTGCTCGAGGACTACTTTATCTCCACCAAGATTCAAAACTGACCATCATTCATAGGGATCTAAAAACTAGCAACATTCTACTAGACAGCCAATTTAACCCCAAAATTTCTGATTTTGGTGTGGCCCGCATCGTTGAAGGAGATCGTTCTTCAATAACAACAGAGGATATTGCTGGGACAATTGGTTATATGCCCCATGAGTACGCAGTAAACGGTATTCTTTCCCCGAAGTCTGATGTATATAGCTTCGGAGTTATAGTGTTAGAGATATTAAGTGGAATCAGAAGTAGAAGCTACAAATTCAAGCATCCAGATCATGATCACAATCTGCTGGGGCAGGCATGGACATTATGGAAAGATGGACGAGCTGTGGGATTTATGGATGTTAACTTTGACCTTACAGTTGTTCCTTCAGAATTATTAAGGTGCCTGCAAGTTGGTCTCTTGTGTGTTCAAAAGTTACCTGAAGATAGACCAACTATGTCTTCTGTAGTTTTTATGTTGAGCAATGAAAGCATTGCACTTCCCCAACCAAAGCAGACTGGGTTCTTTGAAGAAGAGTCAGAGTATCATGGGTACAGCGAGAAAGAGAGTTTTAGTAACAATGCTATGACTATAACTCTATTAGAAGCTCGAAGTTAG 2532 0.3989 MTENASAALCHLKLAAEHDQEEMRRNKLDIIIFAFAFILILQNTSHADHALTPTSSIADGQELISAGQNFSLGFFTPGTSKSRYIGIWYKNITPQTIVWVANRDNPLNDSRGNLTIAADGNIVLFDGAGNRIWFTNSSSSIEEPIAKLLDSGNFVLMDGKKSDSDGYIWQSFDNPTDTMLPGLMLGWDKNLGINRYLTSWKSDNDPSPGNFTFRFDQTEFPELVIRRGMNITFRSGIWDGTRFNSDDWLSFIGITAFKPQLSVTSTVAVYWDEPGDRLSRFVMKDDGLLQRYIWDNKNFKWTLMHEARKDFCDNYGACGVNGICNIKDVPAYCDCLKGFIPNSPEEWDSFNWSGGCIRRTPLNCTQGDRFQKLSWVKLPMLLQFWTNKSKNLEECKVECLKNCSCTAYANSALNEGPHGCLLWFGDLTDIRHLINEEGVQLDLYVRLAASEIESTANASKRRYIALIISVPVALLLCCIIFYLSKKYIKRRTSTGLVTGHRNHNEDQVISPIFDINTILTATDNFSIENKIGEGGFGPVYRGKLANGQEIAVKRLSKTSKQGISEFMNEVGLVAKLQHRNLVSVLGGCTQREERMLIYEYMPNSSLDHFIFDPIQGKFLNWRKRYEIIVGIARGLLYLHQDSKLTIIHRDLKTSNILLDSQFNPKISDFGVARIVEGDRSSITTEDIAGTIGYMPHEYAVNGILSPKSDVYSFGVIVLEILSGIRSRSYKFKHPDHDHNLLGQAWTLWKDGRAVGFMDVNFDLTVVPSELLRCLQVGLLCVQKLPEDRPTMSSVVFMLSNESIALPQPKQTGFFEEESEYHGYSEKESFSNNAMTITLLEARS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00307 843 SMART serkin_6 525 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00307 843 Gene3D Transferase(Phosphotransferase) domain 1 601 810 - -
Phco11g00307 843 Gene3D - 43 172 IPR036426 -
Phco11g00307 843 Pfam S-locus glycoprotein domain 233 342 IPR000858 GO:0048544
Phco11g00307 843 ProSiteProfiles PAN/Apple domain profile. 364 448 IPR003609 -
Phco11g00307 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Phco11g00307 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 489 600 - -
Phco11g00307 843 Pfam Protein tyrosine and serine/threonine kinase 526 795 IPR001245 GO:0004672|GO:0006468
Phco11g00307 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 43 172 - -
Phco11g00307 843 CDD PAN_AP_plant 360 448 - -
Phco11g00307 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 97 206 IPR036426 -
Phco11g00307 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 806 - -
Phco11g00307 843 CDD STKc_IRAK 531 798 - -
Phco11g00307 843 SMART blect_4 54 175 IPR001480 -
Phco11g00307 843 PIRSF SRK 23 842 IPR024171 GO:0004674
Phco11g00307 843 Gene3D Phosphorylase Kinase; domain 1 499 600 - -
Phco11g00307 843 Pfam D-mannose binding lectin 96 201 IPR001480 -
Phco11g00307 843 Pfam PAN-like domain 364 430 IPR003609 -
Phco11g00307 843 ProSiteProfiles Bulb-type lectin domain profile. 48 169 IPR001480 -
Phco11g00307 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 34 789 - -
Phco11g00307 843 ProSiteProfiles Protein kinase domain profile. 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00307 843 SMART ntp_6 365 447 IPR003609 -
Phco11g00307 843 CDD B_lectin 54 175 IPR001480 -
Phco11g00307 843 SUPERFAMILY Protein kinase-like (PK-like) 507 798 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00307 Phco-Chr11 1985208 1988889 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco11g00307 PK_Tyr_Ser-Thr 7e-45 CL0016