Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00306 ATGGAGAAAACCAAGTTCAGCCTTCTATTTCTTGTTACTTGTTGCTATTTCCTATCCTTGTTTCCTACATCTTTGGAAGCAGAGGATGAAATAACTCCTCCACAAACCATCAGTGGCAACCAGACACTAGTCTCACCTTCTCAAAATTTTGAACTGGGTTTCTTCAGTCCTGGCAATTCGACTCACATTTATCTTGGAATATGGTACAAGCGTATCCCGAACCAAACAGTTATTTGGATTGCAAATAGAGACAAACCGCTAGTTAACTCTGGTGGCACCTTGACATTCAGTGGTGATGGCAAGCTCATTCTTCTAAGCCACACGGGAAGTGTTGCATGGTCCTCAAACTCATCTGGACCTGCAAAAAATCCAGTGGCACAGCTTCTAGATTCCGGAAACTTTGTGTTGAAAGACTATGGAAATGAGAGATTTTTGTGGGAGAGTTTTGATTACCCATCTGACACATTGATACCAGGAATGAAACTAGGTTGGAACTTCAAAACTGGCTTGAATCGACTATTGACTTCCTGGAAAACCACTTCTGATCCTTCTCCAGGAGAATACACCTACAGTGTGGATCCACGTGGCCTTCCTCAGCTTTTCCTTCACAAGAGAAACAGGCAGGTCTTCAGAAGTGGACCATGGTATGGACAACAATTCAAAGGTGACCCGGTTCTCAGTGCAAATCCAGTTTTCAAACCCATATTTGTGTTTGATTCTGATGAAGTGTCTTACTCCTATGAGACCAAAGACACCATCATTTCAAGATTTGTGCTGACTCAGTCTGGTTTGATTCAGCATTTTTCATGGAATGATCATCATTCAAGTTGGTTTTCTGAATTTTCAATTCAAGGGGACCGTTGTGATGATTATGGCCTTTGTGGTGCTTACGGTTCTTGTTACATTAATAGCTCCCCTGTTTGCAAGTGTTTGAAGGGTTTTGAGCCTAAGCTTCCGCAGGAATGGGAAAGGTCTGAGTGGTCAGATGGATGTGTTAGAAAAAACACAGAGGTTTGCAGCAATGGAGATGCATTTCAGCAGTTTACAGGAATGAAGCTTCCAGATGCTGCTGAGTTTCGTACAAACTACAGCATCAGCATTGATCACTGTGAGAAAGAATGCTCTAAGAACTGCTCCTGTGTTGCTTATGCAAACCTGGATATAAATGCAAGCGGAAAAGGTTGTATTGCATGGTTTGGGAATTTATTTGATATAAGAGAGGTTTCTGTGAATGGACAAGATTTCTACCTGAGGGTTGCAGCTTCAGAAGTAGGTAAGAACATTGAAGGTTCAAATGCTGATGGAAGTAAAAGGAAGAAACTCATACTGTTTCCTGTGGCTGCATCTGTAACTTCAACAATTATTGTATCAACATTGTGGTTGATAATTAAGAAATGCAGAAGAAATGGAGCCAAACAGACCGGTAGTCAGTTTAGTGTTGGCAGAGTCAGGAGTGAAAGGAATAATGAATTTGAACTTCCAATGTTTGAGATTGCCATGATTGAAGCCGCCACTGGGAATTTCTCTAGTTACAACAAGATTGGAGAAGGAGGATTTGGTCCTGTATACAAGGGTCAACTTCCATCAGGACAGGAAGTAGCTGCAAAAAGGCTATCAGTGAATTCTGGACAAGGCCTGCAGGAGTTCAAGAATGAGGTCATTTTGATCTCCCAACTTCAGCATCGAAATCTTGTCAAGCTTCTGGGTTGTTGCATTGACGGTGAAGATAAAATATTGATCTATGAATACATGCCAAACGGAAGCTTGGACTCCTTATTATTTGATGAAACCAAGCGTTCTGTGCTCAGTTGGAAAAAGAGGCTAGACATAATTATTGGCATTGCTCGTGGAGTTCTCTACCTTCACAGAGATTCAAGACTGAGAATCATCCATAGAGACCTGAAAGCAAGCAATGTTCTTTTAGATAGTGAAATGAATCCGAAAATTTCTGACTTCGGAATGGCAAGAATGTTTGGCGGAGATCAAATTGAAGCAAAGACCAAGAGGGTAGTGGGAACCTATGGATATATGGCCCCAGAGTACGCAATAGATGGGCACTTCTCTTTTAAATCGGATGTTTATAGCTTTGGGGTTTTACTCTTAGAGCTGTTGAGCGGCAAGAAAAACAAAGGATTTGTTCACCCAGATCACAAACTGAATCTCCTAGGCCATGCATGGAAGGTATGGAATGAAGAAAGGGCGTTGGAGGTGATGGATCCATTGGTCGGGAGTAAGTTTCCGACATGTGAAGCTCTAAGGTGTATAAAAGTGGGTCTGTCATGCGTTCAACAGTTCCCAGAAGATAGGCCAACAATGTCATCAGTTGTTTTGATGTTGGAGAGTGAGAGTGTGATGATCCCCCAACCCGGAAGGCCAGGATTATATTCGGAGAGATTTTTCTCTCAGACAAATTCATCATCAGACGCTCCACTCAACTCTGCTTCCGATCACACAACTGCTACTTCGCTTGAGGGTCGTTGA 2481 0.4224 MEKTKFSLLFLVTCCYFLSLFPTSLEAEDEITPPQTISGNQTLVSPSQNFELGFFSPGNSTHIYLGIWYKRIPNQTVIWIANRDKPLVNSGGTLTFSGDGKLILLSHTGSVAWSSNSSGPAKNPVAQLLDSGNFVLKDYGNERFLWESFDYPSDTLIPGMKLGWNFKTGLNRLLTSWKTTSDPSPGEYTYSVDPRGLPQLFLHKRNRQVFRSGPWYGQQFKGDPVLSANPVFKPIFVFDSDEVSYSYETKDTIISRFVLTQSGLIQHFSWNDHHSSWFSEFSIQGDRCDDYGLCGAYGSCYINSSPVCKCLKGFEPKLPQEWERSEWSDGCVRKNTEVCSNGDAFQQFTGMKLPDAAEFRTNYSISIDHCEKECSKNCSCVAYANLDINASGKGCIAWFGNLFDIREVSVNGQDFYLRVAASEVGKNIEGSNADGSKRKKLILFPVAASVTSTIIVSTLWLIIKKCRRNGAKQTGSQFSVGRVRSERNNEFELPMFEIAMIEAATGNFSSYNKIGEGGFGPVYKGQLPSGQEVAAKRLSVNSGQGLQEFKNEVILISQLQHRNLVKLLGCCIDGEDKILIYEYMPNGSLDSLLFDETKRSVLSWKKRLDIIIGIARGVLYLHRDSRLRIIHRDLKASNVLLDSEMNPKISDFGMARMFGGDQIEAKTKRVVGTYGYMAPEYAIDGHFSFKSDVYSFGVLLLELLSGKKNKGFVHPDHKLNLLGHAWKVWNEERALEVMDPLVGSKFPTCEALRCIKVGLSCVQQFPEDRPTMSSVVLMLESESVMIPQPGRPGLYSERFFSQTNSSSDAPLNSASDHTTATSLEGR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00306 826 MobiDBLite consensus disorder prediction 802 826 - -
Phco11g00306 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 583 - -
Phco11g00306 826 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Phco11g00306 826 CDD PAN_AP_plant 339 420 - -
Phco11g00306 826 ProSiteProfiles Protein kinase domain profile. 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00306 826 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Phco11g00306 826 CDD STKc_IRAK 514 780 - -
Phco11g00306 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
Phco11g00306 826 Pfam D-mannose binding lectin 76 178 IPR001480 -
Phco11g00306 826 Pfam Protein tyrosine and serine/threonine kinase 511 777 IPR001245 GO:0004672|GO:0006468
Phco11g00306 826 Pfam PAN-like domain 339 405 IPR003609 -
Phco11g00306 826 SUPERFAMILY Protein kinase-like (PK-like) 491 800 IPR011009 -
Phco11g00306 826 Gene3D Hepatocyte Growth Factor 336 418 - -
Phco11g00306 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 183 IPR036426 -
Phco11g00306 826 SMART blect_4 34 152 IPR001480 -
Phco11g00306 826 CDD B_lectin 35 152 IPR001480 -
Phco11g00306 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Phco11g00306 826 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Phco11g00306 826 Gene3D Phosphorylase Kinase; domain 1 471 583 - -
Phco11g00306 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 770 - -
Phco11g00306 826 Gene3D Transferase(Phosphotransferase) domain 1 584 786 - -
Phco11g00306 826 Gene3D - 24 149 IPR036426 -
Phco11g00306 826 SMART serkin_6 508 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00306 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Phco11g00306 826 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Phco11g00306 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Phco11g00306 826 SMART ntp_6 340 419 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00306 Phco-Chr11 1978692 1982281 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco11g00306 PK_Tyr_Ser-Thr 4e-49 CL0016