Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00289 ATGGCGCAGAAGCAGAAGCGTCCTTCCCCTCTTGACGAGCCACCAACGGCTTCTTCTTCAGATTCCGAGGAAGAAGAAACGCAGCAACCATCCTCTCTGAGGCATGGAGAGGAAGAGGAAGAAGAAGCTTCGTCGGGAGAAGAGGAAGAAGAATCCTCCGGAGAAGAGGCAGAAGATGATGATCTTCCACCACCTATCAACAAAACCAACCCACCACCCCCTTCCACGAACCCTCACCCACAACCCTCATCCTCTGATTCCGAAACAGCATCCGAATCCGAGACCGAGTCGGAAACTGAATCCACTCCTGCTAAGGCGGTGAAGCCCCTCGCATCCAAGCCCATGGACCAGGCCCAGAAGCCCAAGGCCCTACCTTCTCCGGCGCCGCCCAAACCGCCACTGAAACGCGCCGCCGAAAATATCAACTCCCACATCGCGAAGAAAAAGAAGAAATCCGGCGATTCTTCTTCTTCCGCTGCCGCTTCTGACGAGGAGATGGAAGACGGGAAGAAGTCCGGCGATCAAATGAAGAAGTCTCAGAGGCTGTGGAGCGAGGATGACGAAATCGCCATTCTGAAGGGCTTGGCTGATTTCACCTCAAAAACAGGGCACGACCCTCTTAAGTTTGAGGGTGGCAATGCTTTCCATGCTTTCCTGAAGAAGTCGCTCCATGTGGAAGTTACCAGCAACCAGCTGAAGGAGAAGGCGCGGAGACTGAAGAAGAAGTATGAGACCGCTGCAGTGAGAGGGAATGGCGCTGATGGCCTTACGTTTTCAAAGCCGCACGATCAGAAAACGTTTGAGTTGTCGAGAAAGGTATGGGGAAGTGAGCTAGATGGTGCAGTGGCCAATGGGGCAGTGGAAAAGCCCAAGGCTAACGGGAATGCTACTAAGAGTCCGAAGAAGAAGGAAACCGGTAGCAGGAATGTGGCTTCTGCCAAGAAAGCTAAACCTGAACCGAAACAGGAGGTGGTGCCAGGGCCGCGCTCGGAGTTGAAGGAATCTGAAAAGACGCAGATTAATCAAAAGCCAGTAAGTTGTGAAGTGAGTATGTTTTTGCATGCAGTGTCCCGCTTTAAAGAGGGTCTGGGTGTTTTTGGGCTGGACGAGGGTGATGTGATGAGGGGGTTGGAATTGATTGGTGAATCGAAGAGGGCAGAGTTGAGGGCAAAGTGGAAGAAGTTACAACGTACTGAGTTGGAACTGTTTGCTAATCGCTCAGAACTGATAGGGGAGCAGACTAAGTTGATAGTTGAGGCACTGCGGTCGTCCAACCATTAG 1281 0.5222 MAQKQKRPSPLDEPPTASSSDSEEEETQQPSSLRHGEEEEEEASSGEEEEESSGEEAEDDDLPPPINKTNPPPPSTNPHPQPSSSDSETASESETESETESTPAKAVKPLASKPMDQAQKPKALPSPAPPKPPLKRAAENINSHIAKKKKKSGDSSSSAAASDEEMEDGKKSGDQMKKSQRLWSEDDEIAILKGLADFTSKTGHDPLKFEGGNAFHAFLKKSLHVEVTSNQLKEKARRLKKKYETAAVRGNGADGLTFSKPHDQKTFELSRKVWGSELDGAVANGAVEKPKANGNATKSPKKKETGSRNVASAKKAKPEPKQEVVPGPRSELKESEKTQINQKPVSCEVSMFLHAVSRFKEGLGVFGLDEGDVMRGLELIGESKRAELRAKWKKLQRTELELFANRSELIGEQTKLIVEALRSSNH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00289 426 MobiDBLite consensus disorder prediction 81 102 - -
Phco11g00289 426 MobiDBLite consensus disorder prediction 65 80 - -
Phco11g00289 426 Pfam Protein of unknown function, DUF573 180 275 IPR007592 GO:0006355
Phco11g00289 426 MobiDBLite consensus disorder prediction 41 60 - -
Phco11g00289 426 MobiDBLite consensus disorder prediction 295 338 - -
Phco11g00289 426 MobiDBLite consensus disorder prediction 284 340 - -
Phco11g00289 426 MobiDBLite consensus disorder prediction 163 183 - -
Phco11g00289 426 MobiDBLite consensus disorder prediction 12 26 - -
Phco11g00289 426 MobiDBLite consensus disorder prediction 1 183 - -
Phco11g00289 426 PANTHER BNAANNG10740D PROTEIN-RELATED 65 420 IPR007592 GO:0006355
Phco11g00289 426 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00289 Phco-Chr11 1884966 1886246 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Phco11g00289 DUF573 2.3e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00289 11 1884966 1886246 Phco11g00289 11 1884966 1886246 ECH