Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00281 ATGAAGACTACCACAAGAAATCTTAATCCTCTTGTTTTCTTGGGGTCATTATTCTGTCTCTTTATGACGGGTTTTAGTGCTGAAAGTGACATCTATTGCCTGGAAACCATCAAGAACATGGACCCGTCTAATATCTTATCTAGCTGGGATTTCAAGACCAACACTGAGGGTGTCATATGTACATTCAGCGGTGTTGAATGCATCAGCAATCATGTGGAAGATAGAGTAATCGGTCTCTGGCTATCTAACATGGGGCTGAAGGGCCAGTTTCCTAGTTGCATTGAAGATTTCACATGGTTGCAGACTCTGAACCTCTCACACAACGAGCTTTCCGGATACATCCCAAACGATATATCATCTAAGCTGCTATATCTGGCCACACTTGATCTCTCAAATAATTATTTCTCTGGTGAAATTCCAAAGGGTATTGCCAATTTGTTAGGTTTAATTACCCTTCTACTTGATGGCAACCAGTTAACGGGCCATATCCCACAAGATCTTGGGTTGCTTCCCTGGCTGAGAGATTTTAGTGTTGCTAACAACTTGTTGGAAGGGCCAGTGCCAGGTTTTCGGAGCAATCTTAATGTGAGTTTGAGCTATGTCAATAATAGTGGACTCTGTGGGGGAACACTAGGAAGATGTGACGAGAGCTTGTTTGGTAGATCGTTTTGGTATAGTTTTATTATTGGTTTTGTTTCCTCAGCTACTTCTGTTCTAGTATCTTGCATGTATTATTATGCACCTTGGACAGAATTCAAAAAGAGGAGGAGTAACGCAATTCATCCCCTAATCAAGAAGCCGAACACTGAACAAGAAGCTGAATTGCTACCACTGGCCTTTCAAGAGCAACGACGCAAAGAGCTATCAATGTTGTTGGAGAGATTGATTACTAGAATGAGCTTCATGGAATTATGCAAGGCAACTGATTACTTTTGCACGGATAACGTGTTGGGGATAGGAACGACAGGGATTATGTACAAGGCAAAGGTATCAAATAAATGTTTTCTGGCAGTTAAAAGAATATATGATGCTGATAAGTACAAGTGGGAATTTTTACTTGAAATAATGATTCCGGGAAGACACAGGCACAGAAACATAGTTCCACTGCATGGATTCTGCATAGAGAAACAGGAAAGGGTTTTGGTGTATAAGTACATTTCTAATGGAAGACTCAGTGATTGGTTACAATCTGACGAGGAACATCATCCAATAAAATTAGAATGGCCTGAGAGGATTCACATTGCACTTGGGCTCGCAAGAGGTTTATCTTGGCTCCATGAAAAGTGCAAGATAGTCCACCTCAATTTAGATTCGGAGTGTGTCTTGCTGGACAAGAGTTTTGAGCCAAAAATTTCAAATTTTAGCAAGGCAAAATTCCTACACCAGAGTGTTGAAGATCATGTGAGAATGAAAATGTTTCTGGTTGATGGACTTGGAGTGAAGGGTTATGCTGAGAGGGATGTCTATGATTTTGGAATAATCCTTTTTGAACTTATAACGGGGAAAAGACTAAGTCAATCGGCTGATTCTTCAGACAGTATTAGTGGCCATTTGATGAACTATATACGCAAGAACTTGTTCACTGATCCTGCTGACTTTTATGACGCCATTGACGATGGTATCATTGGGAAGGGTTTTGATGATAAAATCGTAGGTCTTCTTGAAGTTGCATGTGACTGTGTTAAGACATCTTTAAAGCAAAGGCCAAAGATGGTTGATATGCACCAAACTATAAGAGCTATGTGGGAGGGCTACAAACCCTGGTTTGTTTCTGAAAGTCTGGAACTGTCTATGGATTGTTCTGACCATATAACGTGTATCAGCGAAATTGAATGTATTGAATAG 1845 0.4038 MKTTTRNLNPLVFLGSLFCLFMTGFSAESDIYCLETIKNMDPSNILSSWDFKTNTEGVICTFSGVECISNHVEDRVIGLWLSNMGLKGQFPSCIEDFTWLQTLNLSHNELSGYIPNDISSKLLYLATLDLSNNYFSGEIPKGIANLLGLITLLLDGNQLTGHIPQDLGLLPWLRDFSVANNLLEGPVPGFRSNLNVSLSYVNNSGLCGGTLGRCDESLFGRSFWYSFIIGFVSSATSVLVSCMYYYAPWTEFKKRRSNAIHPLIKKPNTEQEAELLPLAFQEQRRKELSMLLERLITRMSFMELCKATDYFCTDNVLGIGTTGIMYKAKVSNKCFLAVKRIYDADKYKWEFLLEIMIPGRHRHRNIVPLHGFCIEKQERVLVYKYISNGRLSDWLQSDEEHHPIKLEWPERIHIALGLARGLSWLHEKCKIVHLNLDSECVLLDKSFEPKISNFSKAKFLHQSVEDHVRMKMFLVDGLGVKGYAERDVYDFGIILFELITGKRLSQSADSSDSISGHLMNYIRKNLFTDPADFYDAIDDGIIGKGFDDKIVGLLEVACDCVKTSLKQRPKMVDMHQTIRAMWEGYKPWFVSESLELSMDCSDHITCISEIECIE 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00281 614 Coils Coil 278 298 - -
Phco11g00281 614 Gene3D Ribonuclease Inhibitor 34 214 IPR032675 -
Phco11g00281 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 580 IPR046959 -
Phco11g00281 614 SUPERFAMILY Protein kinase-like (PK-like) 288 586 IPR011009 -
Phco11g00281 614 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Phco11g00281 614 SUPERFAMILY L domain-like 45 219 - -
Phco11g00281 614 Gene3D Transferase(Phosphotransferase) domain 1 386 587 - -
Phco11g00281 614 ProSiteProfiles Protein kinase domain profile. 311 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00281 614 FunFam Nuclear pore complex protein NUP107 31 195 - -
Phco11g00281 614 Gene3D Phosphorylase Kinase; domain 1 275 385 - -
Phco11g00281 614 Pfam Protein kinase domain 314 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00281 Phco-Chr11 1847092 1849266 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Phco11g00281 Pkinase 9.2e-23 CL0016