Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00248 ATGGGGAATGGAGGTTTTAGCACACTAACTCTTGTGTTGTGCTATGCAATGCTAATCGTTTCATTCCTCCCTCCTACAAATCCACTAAGGTTCAGCTACACCCACTTTTGGGAAGATGATGCATGGCTGCAGCTGCAAGGAGACGCAGAAGTTTCACGTTCAGAAATCCAAGTCACATCTAACAGGGAAGGCCAAAGCAACAGTTACAGTGTTGGACGTGTCACACCTCTTGAAAATCTGCAGCTCTGGGATATGAGTTCTGGGAAACTTACAGACTTCACTACCCAATTTTCGTTCTCTGTTTATTCAGATGAAGTTCAGTATGGAGATGGTTTGACATTCTTCTTGGCGGATCCTGGGCTTCCCCTTTTGAGTAACATCACAGAAGGGGGTGGTCTTGGCCTTGTGGATGGTGGCCAAGTGTTGAACTCAACTCAGCACTCATTTGTGGCAGTGGAGTTTGACACCTTCCAAAATCCATGGGACCCGGAAGACCCTCATGTAGGTTTGAATTTCAACTCTATGGAGTCCAACATAACTGTACCATGGTTAGCTGATATGTCAAAAAATGATTCTTACAGTTGTAGCATTGAGTACAATTCCACCACTCTTAGTTTAAGTGCTTCTTTCAGTGGCTACAATTACGAAAAAGGTGGTCGAGTAGAAAATAGCTTTTCATACCAAGTTGATTTGAGAAAGCACTTACCAGAGAGGGTTATGGTTGGCTTCTCCGCAGCCACGGGAGAATTGTTTGAGAACCATATTCTGAAGTCATGGTCATTTAGTTCAAACTTAAATATTAGTCATACTTCTGATGGTAATAATAAAGTAGTTGAGTGGCTAGGAATTGGGATGGGTTTGGTTGTTTTGTTAGGATTGTCTTGTTTTCTGATCTGGAGAAGGATTAAAGGAAAGGGAGAAGTCTTGGAACTTGATCTACAAATGGATGACGAATTCCAAAAGGGAATAGGACCCAAGAGGTTTCGCTACAATGAACTGGAAAGTGCAACAAATAAATTTTCAGAGTCAGAGAAGCTGGGACAAGGTGGCTTCGGCAGCGTGTATAGAGGTTTTCTGAAGGATTTAAACTCCTACGTTGCTATCAAGAGGGTATCAAGAGAGTCTAAGCAGGGGGTAAAGGAATATGCTACCGAAGTTAAGATCATTAGCCAGTTGAGGCACAAGAATCTGGTGCAACTCCTTGGTTGGTGCCATAGAGAAAAAGATCTCCTTCTTGTGTATGAATTCATGCCAAATGGAAGCTTAGATTTCCATTTATATGGGAAGGGATTCTTGACATGGCCAGTAAGGTATAACATAGCTCTAGGCCTGGCTTCAGCATTGCTATACCTGCAAGAAGAGTGGGAAAAATGTGTTCTTCATAGGGACATCAAATCAAGCAACATAATGTTGGATTCAAGTTTCAATGCTAAGCTTGGTGATTTTGGTTTGGCTAGGTTGGTGGATCATGAGAAGGGGTCACAAACCACATTTATAGCTGGGACAAGGGGGTACATTGCGCCAGAATATGTGACTACAGGCAAAGCTTATAAGGAATCTGACATATACAGTTTTGGGGTTGTTTTATTGGAGATAGCTAGTGGAAGAAAACCCATAGACCTAAGTGCGAAGGAGGGGCAGGTAACAGTAGTAGAGTGGGCTTGGGAGCTGTATGAATTGGGAGAGATAGTTGAAGTAGCAGACCCAAAACTGTGTGGAGCATTTGATGAGGAGCAAATGGAAAGGTTGGTGGCTATAGGGCTTTGGTGTGCTCATCCAAACTACAGATTCAGGCCCTCTGTGATGCAAGTCATCCAAATGCTTAAATTTGAAGCTGAATTGCCAACTCTCCCAAAGTTCTTGCCACTCCAAAACTTCTATCCTTTAACAGTCAAAGCAAATTTTTCATCACCTTCAAACACTGTATTTAAGGAGGATTTTTTGTAG 1947 0.4248 MGNGGFSTLTLVLCYAMLIVSFLPPTNPLRFSYTHFWEDDAWLQLQGDAEVSRSEIQVTSNREGQSNSYSVGRVTPLENLQLWDMSSGKLTDFTTQFSFSVYSDEVQYGDGLTFFLADPGLPLLSNITEGGGLGLVDGGQVLNSTQHSFVAVEFDTFQNPWDPEDPHVGLNFNSMESNITVPWLADMSKNDSYSCSIEYNSTTLSLSASFSGYNYEKGGRVENSFSYQVDLRKHLPERVMVGFSAATGELFENHILKSWSFSSNLNISHTSDGNNKVVEWLGIGMGLVVLLGLSCFLIWRRIKGKGEVLELDLQMDDEFQKGIGPKRFRYNELESATNKFSESEKLGQGGFGSVYRGFLKDLNSYVAIKRVSRESKQGVKEYATEVKIISQLRHKNLVQLLGWCHREKDLLLVYEFMPNGSLDFHLYGKGFLTWPVRYNIALGLASALLYLQEEWEKCVLHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTFIAGTRGYIAPEYVTTGKAYKESDIYSFGVVLLEIASGRKPIDLSAKEGQVTVVEWAWELYELGEIVEVADPKLCGAFDEEQMERLVAIGLWCAHPNYRFRPSVMQVIQMLKFEAELPTLPKFLPLQNFYPLTVKANFSSPSNTVFKEDFL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00248 648 PANTHER - 57 612 - -
Phco11g00248 648 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 269 IPR013320 -
Phco11g00248 648 SMART serkin_6 340 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00248 648 FunFam Lectin-domain containing receptor kinase A4.3 417 628 - -
Phco11g00248 648 SUPERFAMILY Protein kinase-like (PK-like) 324 625 IPR011009 -
Phco11g00248 648 ProSitePatterns Legume lectins beta-chain signature. 150 156 IPR019825 -
Phco11g00248 648 Gene3D - 27 280 - -
Phco11g00248 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Phco11g00248 648 CDD lectin_legume_LecRK_Arcelin_ConA 29 265 IPR001220 GO:0030246
Phco11g00248 648 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Phco11g00248 648 Pfam Protein kinase domain 341 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00248 648 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
Phco11g00248 648 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Phco11g00248 648 FunFam L-type lectin-domain containing receptor kinase IX.1 325 416 - -
Phco11g00248 648 CDD STKc_IRAK 346 609 - -
Phco11g00248 648 ProSiteProfiles Protein kinase domain profile. 340 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00248 648 Gene3D Transferase(Phosphotransferase) domain 1 417 627 - -
Phco11g00248 648 Pfam Legume lectin domain 29 272 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00248 Phco-Chr11 1589047 1590993 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco11g00248 Pkinase 5e-49 CL0016