Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00244 ATGGCTCATTGCCATGTTGGTCTCCATGCAACTAACCATCTATTCTGTTATGCAGTGGGAATGGTGTTCTTACTTCTTATGGTTAGTTTTGCAAACCCACTTTCATTTCGTCACCAGGGATTTGAGAATAATGATGCCAAGATTGAAGGAGATGCTACTTTGTCACAGTCAGAAATCCAACTCACTAAAACCACAAGGTACCAAAGTAATGCTTATAGTGTTGGGAGAGTCACAAGTTTTGAGAGATTGCACCTGTGGGACAGGAGCACAAGAAAAATCACTGACTTCACTACCGAATTTTCCTTTGTCATTTTCTCAAATGAGACTAGTTTTGGAGATGGCTTGGCTTTTTTCTTTGCAGATCCAGAGCTCCCACTTTCCCATCAAATACAACAAGGAGGTGGTCTTGGTCTTCTGGATGGTAACCAATTATTGAATTCAACTAAACATCCATTTTTAGCAGTGGAGTTTGACACGCACCAAAATTCATGGGATCCACCTGGCCCTCATGTAGGTATAAATTTCAACTCCATGAGATCTAACAAAACTGTTCCATGGTCCATTGATATTAGGCAAATGAAAGTTTATTATTGTGTAATTGAGTACAATGCAACTACTCACAGTTTAAATGTTTCTTTCACTGGAATCAATTTCAATGCCAAGCCAGTAAAAAGTTATATCTCATGCAATGTTGACCTGAGATATTACCTACCAGAGTGGGTTATATTTGGCTTCTCAGCTGCTACAGGAGTTATGTTTGAGTTGAACACACTGCACTCATGGTCGTTCCATTCAACTTTACAAATTAATGAGAATGTGCCAAATAAGATACCTCCAATTCTAGCCTCACCAATCCCAAATCCTAGTCCTTCACCAATTTCCACTGATCATATTAGCTCTAAACAAGAGGGAAACAAAGGTTTATTGATGGGACTAAAAGTTGGGGTAGGCATAGCTGCAAGTTTCCTTATTTTAGGGTTGGTTTGTATTTTAATGTGGAAGAGGAGGGCTAAAGGGAAAAAAGAAGATTCAATTCTTGATCTGAGCATGGATGATGAATTCCAAAAGGTCATTGGACCCAAAAGATTCTGCTATAAAGAATTGGCAAGTGCGACAAATAACTTTGCAGAGTCACAAAAGATTGGACAGGGTGGTTTTGGTGGTGTGTATAAAGGCAATTTGAAAGAATTGAACTCCAACGTTGCTATAAAGAGGATATCAAGAGAATCTAGGCAAGGAGCAAAGGAATTTGCAAGTGAAGTTAAGACCATCAGCCAACTAAGGCACAGGAATTTAGTACAATTAATTGGTTGGTGCCACAAGAAGAAAGATCTCCTCCTTATATACGAGTTCATGCAAAATGGTAGCTTAGATTCCCACCTATATCGTGGAAAAAGCATCTTGACATGCCAGATGAGGTACAACATTGCCATGGACTTGGCTCTGGCAGTGTTGTACCTTCATGAAGAATGGGAGCAGTGTGTGCTTCATAGGGACATTAAATCCAGCAACATTATGTTGGATTCAAGTTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCTAGGCTGGTTGATCATGAGAAAGGATTCCAAACTACAATTCTAGCAGGGACAAGAGGCTACATAGCCCCTGAATACTTCACTACAGGGAAGGCTAGGAAGGAATCTGATATATACAGTCTTGGGGTTGTTTTACTGGAGTTGGCCACTGGAAGAAAACCAGTTGATCTCAATGCCAAGGAAGGTCAAATTACCATATTTGAGTGGGTTTGGGAGCTCTATAAATTGGGAAAGTTACTTGAAGTGGTAGACACAAAACTTGGGGGAGCATTTGATGAGGAACAAATGAAACATTTAGTGATTGCTGGCCTTTGGTGTGCCAATCCAGATTATACATCCAGGCCCTCTGTAAGGCAATTGATTCAAGTGCTCAAGTTTGAAGCTCCTTTACCAGTTCTCCCACGAAAATTGCCTGAGCCAAATTATCATTCTCCAATTATGAGTACAATATTTGCTTCAATTTCTTCTCCCCTCTCCGGCTACATGTTAGAACCAAATACTATGTAA 2067 0.4006 MAHCHVGLHATNHLFCYAVGMVFLLLMVSFANPLSFRHQGFENNDAKIEGDATLSQSEIQLTKTTRYQSNAYSVGRVTSFERLHLWDRSTRKITDFTTEFSFVIFSNETSFGDGLAFFFADPELPLSHQIQQGGGLGLLDGNQLLNSTKHPFLAVEFDTHQNSWDPPGPHVGINFNSMRSNKTVPWSIDIRQMKVYYCVIEYNATTHSLNVSFTGINFNAKPVKSYISCNVDLRYYLPEWVIFGFSAATGVMFELNTLHSWSFHSTLQINENVPNKIPPILASPIPNPSPSPISTDHISSKQEGNKGLLMGLKVGVGIAASFLILGLVCILMWKRRAKGKKEDSILDLSMDDEFQKVIGPKRFCYKELASATNNFAESQKIGQGGFGGVYKGNLKELNSNVAIKRISRESRQGAKEFASEVKTISQLRHRNLVQLIGWCHKKKDLLLIYEFMQNGSLDSHLYRGKSILTCQMRYNIAMDLALAVLYLHEEWEQCVLHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGFQTTILAGTRGYIAPEYFTTGKARKESDIYSLGVVLLELATGRKPVDLNAKEGQITIFEWVWELYKLGKLLEVVDTKLGGAFDEEQMKHLVIAGLWCANPDYTSRPSVRQLIQVLKFEAPLPVLPRKLPEPNYHSPIMSTIFASISSPLSGYMLEPNTM 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00244 688 ProSitePatterns Protein kinases ATP-binding region signature. 381 404 IPR017441 GO:0005524
Phco11g00244 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Phco11g00244 688 Gene3D Transferase(Phosphotransferase) domain 1 452 663 - -
Phco11g00244 688 CDD STKc_IRAK 381 645 - -
Phco11g00244 688 Gene3D - 32 277 - -
Phco11g00244 688 Gene3D Phosphorylase Kinase; domain 1 360 451 - -
Phco11g00244 688 FunFam L-type lectin-domain containing receptor kinase IX.1 32 276 - -
Phco11g00244 688 CDD lectin_legume_LecRK_Arcelin_ConA 34 267 IPR001220 GO:0030246
Phco11g00244 688 Pfam Legume lectin domain 34 272 IPR001220 GO:0030246
Phco11g00244 688 ProSitePatterns Legume lectins alpha-chain signature. 237 246 IPR000985 -
Phco11g00244 688 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Phco11g00244 688 PANTHER - 52 648 - -
Phco11g00244 688 ProSiteProfiles Protein kinase domain profile. 375 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00244 688 Pfam Protein kinase domain 376 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00244 688 SUPERFAMILY Protein kinase-like (PK-like) 359 670 IPR011009 -
Phco11g00244 688 FunFam L-type lectin-domain containing receptor kinase IX.1 360 451 - -
Phco11g00244 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 272 IPR013320 -
Phco11g00244 688 FunFam Lectin-domain containing receptor kinase A4.3 452 664 - -
Phco11g00244 688 SMART serkin_6 375 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00244 Phco-Chr11 1562953 1565019 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco11g00244 Pkinase 6.7e-52 CL0016