Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00174 ATGAATATTTCATTTATTATCAATGTGGTTCTTCTACTTGCAATTATATTGATCTTGCTGCTTTACTATAACACATCCACAAAGCTGAATAAAATAGCCAAGGGGCAGATTCCCGCTGCCATAGAAAAAGAGGATGACGTGGAGATCAGTGTTGACAAGAAGATAGAGATAGGAGAGGGGACAATGATTATGACAGTGGAAGAGAGAAAGGAACTGATATTCTTTAATGATAAGCCAAAATTTCAAATGGGTGAACTTCTTAGGGCTTCTGCCGAGGCACTAGGCCATGGGATCTTGGGAAACAGTTATAAGGCTATGCTCAATAGTGGACCTACCATTGTCGTAAAACGGCTAAGGGACTTGAAGCCGTTCACTAAGGAGGAATTTGCCAAGATATTAAACGTCATTGCTGATATGAAGCACCCCAATTTGTTGCCCTTGCTTGCTTACTACCACTCTAGAGATGAGAAACTCATGCTTTACTCCTATGCAGCGAATGGAAATCTTTTCACCCGACTTCATGATAGAGGTGGGAACCGGGCTCCGTTCAGTTGGAACTCAAGATTGTCAGTTGCAAGAGGAGTGGCTCGAGCATTGGTGTACCTGCACCTCAACCACAAGTTCCAAAACATTGTTCCACACGGCAACTTGCGGTCTTCGAACGTACTATTCGATGAAAACGATGCGGTTCTTGTTTCTGACTTCGGTCTTGCCTCCTTGATAGCACAACCAATCGCAGCTCAGCACATGGTTGTTTACAAATCACCTGAATATGGGTATGCAAGAAAGGTGACAATGCAATCCGATGTGTGGAGCTATGGTTCAGTTTTGATAGAGCTTCTAACCGGCAAAGTATCTATTAACTCAGCTCCACCAGGAACGAATGGGGTGGATCTATGCAGTTGGGTTCACAGAGCTGTGAGGGAAGAATGGACTGCTGAGATCTTTGACAAAGAAATCTCTGGCCAAAAGAGGGCACTTCCTGGGATGCTGAGGCTGTTGCAGATTGCAATGCGTTGCATTGAGAGGTTCCCTGAGAAGCGTCCAGAGATGAGAGAGGTGATGAGAGAAGTGGAGAAAATACAGGCCCCAGTGATCTCTGAAGATGATGATGATGTGTCTGGGGATAGGTCCCTAACTGATGACTCCCTTTCAACCAGTACCTCTATGATTGGAGATGAAAGATAG 1188 0.4461 MNISFIINVVLLLAIILILLLYYNTSTKLNKIAKGQIPAAIEKEDDVEISVDKKIEIGEGTMIMTVEERKELIFFNDKPKFQMGELLRASAEALGHGILGNSYKAMLNSGPTIVVKRLRDLKPFTKEEFAKILNVIADMKHPNLLPLLAYYHSRDEKLMLYSYAANGNLFTRLHDRGGNRAPFSWNSRLSVARGVARALVYLHLNHKFQNIVPHGNLRSSNVLFDENDAVLVSDFGLASLIAQPIAAQHMVVYKSPEYGYARKVTMQSDVWSYGSVLIELLTGKVSINSAPPGTNGVDLCSWVHRAVREEWTAEIFDKEISGQKRALPGMLRLLQIAMRCIERFPEKRPEMREVMREVEKIQAPVISEDDDDVSGDRSLTDDSLSTSTSMIGDER 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00174 395 MobiDBLite consensus disorder prediction 359 395 - -
Phco11g00174 395 MobiDBLite consensus disorder prediction 359 373 - -
Phco11g00174 395 MobiDBLite consensus disorder prediction 379 395 - -
Phco11g00174 395 SUPERFAMILY Protein kinase-like (PK-like) 92 362 IPR011009 -
Phco11g00174 395 Gene3D Phosphorylase Kinase; domain 1 59 163 - -
Phco11g00174 395 Gene3D Transferase(Phosphotransferase) domain 1 164 371 - -
Phco11g00174 395 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 362 IPR046959 -
Phco11g00174 395 ProSiteProfiles Protein kinase domain profile. 88 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00174 395 SMART serkin_6 88 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00174 395 Pfam Protein tyrosine and serine/threonine kinase 92 357 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00174 Phco-Chr11 1134184 1135525 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco11g00174 PK_Tyr_Ser-Thr 1.1e-30 CL0016