Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00126 ATGGCATCGTCCAAGGTGGTGGTGACGACGAATCCCGATGTGCCATCTCAGAGTTCGATTTCGAGTCAGGTATGGGACGAGGTGGTCGCGGGCACTGAATCTCAGGACATGACAATCAACCTCCACGATTTGTTGTTGACCTCCGTTGTCACAAACGACGCCGTTCCGCCCTCTCGCGGAGGAAGGGGAAAGAGAAAGCCCGTGGAGGAAGCTGTCGTGGATAGGGCCACTCAACAGAAACAGAGAAGGATGATCAAAAACAGAGAATCTGCCGCTAGGTCCAGGGAACGAAAACAGGCTTATACAGTTGAGTTAGAGTCTTTGGTTACAATTCTCGAGGAAGAGAATGCTCGTTTGTTAAAGGAAGAGGCTGAAAGGAGAAGGCAGAGGTTCAATGAGCTCATGGAATGCCTTATTCCAGTTGAGGAGAAGAGTAAACCAAGAAGAATGCTTCGGAGGGTGAATTCAGCCCAGTGGTGA 480 0.5021 MASSKVVVTTNPDVPSQSSISSQVWDEVVAGTESQDMTINLHDLLLTSVVTNDAVPPSRGGRGKRKPVEEAVVDRATQQKQRRMIKNRESAARSRERKQAYTVELESLVTILEEENARLLKEEAERRRQRFNELMECLIPVEEKSKPRRMLRRVNSAQW 159
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00126 159 Gene3D - 77 133 - -
Phco11g00126 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 129 IPR004827 GO:0003700|GO:0006355
Phco11g00126 159 MobiDBLite consensus disorder prediction 52 97 - -
Phco11g00126 159 Coils Coil 102 134 - -
Phco11g00126 159 CDD bZIP_plant_BZIP46 79 125 - -
Phco11g00126 159 SMART brlzneu 75 137 IPR004827 GO:0003700|GO:0006355
Phco11g00126 159 Pfam bZIP transcription factor 78 122 IPR004827 GO:0003700|GO:0006355
Phco11g00126 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Phco11g00126 159 SUPERFAMILY Leucine zipper domain 79 130 IPR046347 GO:0003700|GO:0006355
Phco11g00126 159 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 53 158 IPR043452 GO:0003700|GO:0045893
Phco11g00126 159 MobiDBLite consensus disorder prediction 59 97 - -
Phco11g00126 159 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 77 138 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco11g00126 Phco-Chr11 811843 813622 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco11g00126 bZIP_1 8.3e-13 CL0018