Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00120 ATGGAAGAAGCTCACCGGAACCCGTTGAAGCCGCGCCTTGAGCGGCGGAACGCCATGAAGAACATCGATTACCGGTTGAAGGAGGATGAAGACACAGACACCGACACGGACATAGATATAGGTAATTTGGATGAAAGGAGTTTCCGAGTGGAAGGAATCGACGGCGAATTTGACCGTATCTTTCGGAGCTTGGGGCTGTCTGGGCCCGAGGACTTTGCCATCCCAGCAGCGGCTTGGAAAGAAGCCCAGGCCCAAAAGGCCCGCAGCACCGTGAACCTTCAGCTCGAACCGTCACAGAATAAAAAACAGAGTGAGGGGGGGATAAACGGCGTTAGGCCTCCCGTTTTGGAACCGACGCAGGTCACCTCTACTTGGACCTCCCAACAACCAACGGAGAGGGACCCATTTTCTGATTCCGTGTCACGTGATGATGACAGTGATGTTGGTGTTGAAGCTGAAATTGAAGAGGTTTCTGCTTTGGTCGAGAATGAGACCCTCGATATTCATAATATGTCGCCGGATGTGAGCGGTTATTTCCGGTCGTGGCAAAAGGGCGAGATCTTGGGAAAGGGCTCTTTTGGGACTGTTTATGAAGGCTTCACCGATGATGGGAACTTTTTTGCTGTAAAGGAGGTGTCTTTACTGGATGACGATAGCCAGGGCAAACAGAGCATCTTCCAGCTTCAGCAGGAAATCTCTCTTTTGAGTCAGTTCCGACACGACAACATAGTTCGATATCTTGGCACTGACAAGGATAATGATAAGCTGTATATCTTCCTTGAACTTGTAACAAAAGGATCATTAGCAAGTCTCTATCAAAAGTATCGATTAAGGGACTCTCAAGTTTCTGCATACACAAGACAGATTTTGAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAAATGGGTCCGTCAAGCTTGCAGATTTTGGATTGGCGAAGGCAACCAAGTTGAATGATGTTAAATCAAGTAAAGGCTCTCCGTACTGGATGGCCCCCGAGGTTGTTAACTTGAGGAACCGTGGATATGGGTTACCAGCCGATATATGGAGCTTAGGATGTACAGTACTAGAAATGTTGACGCGGCAACCTCCTTACTCTCATTTGGAAGGAATGCAAGCGATATTTCGAATTGGCAGTGGTCAACCTCCGCCTGTTGCAGAATCTTTGTCAACAGATGCCCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAACAAACGGCCAACTGCTGCTCGCCTATTGGACCATCCATTTGTAAAGACAACACTTCTGTCTCCCATTAGTCCAATTTCTCCAAGTATTAATCTTTTACTGTCTTGA 1368 0.4693 MEEAHRNPLKPRLERRNAMKNIDYRLKEDEDTDTDTDIDIGNLDERSFRVEGIDGEFDRIFRSLGLSGPEDFAIPAAAWKEAQAQKARSTVNLQLEPSQNKKQSEGGINGVRPPVLEPTQVTSTWTSQQPTERDPFSDSVSRDDDSDVGVEAEIEEVSALVENETLDIHNMSPDVSGYFRSWQKGEILGKGSFGTVYEGFTDDGNFFAVKEVSLLDDDSQGKQSIFQLQQEISLLSQFRHDNIVRYLGTDKDNDKLYIFLELVTKGSLASLYQKYRLRDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLPADIWSLGCTVLEMLTRQPPYSHLEGMQAIFRIGSGQPPPVAESLSTDARDFILKCLQVNPNKRPTAARLLDHPFVKTTLLSPISPISPSINLLLS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00120 455 Pfam Protein kinase domain 183 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00120 455 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 84 438 - -
Phco11g00120 455 SUPERFAMILY Protein kinase-like (PK-like) 180 446 IPR011009 -
Phco11g00120 455 MobiDBLite consensus disorder prediction 90 148 - -
Phco11g00120 455 MobiDBLite consensus disorder prediction 1 21 - -
Phco11g00120 455 SMART serkin_6 182 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00120 455 ProSiteProfiles Protein kinase domain profile. 182 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00120 455 MobiDBLite consensus disorder prediction 90 106 - -
Phco11g00120 455 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Phco11g00120 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Phco11g00120 455 FunFam Mitogen-activated protein kinase 1, putative, expressed 180 448 - -
Phco11g00120 455 MobiDBLite consensus disorder prediction 116 135 - -
Phco11g00120 455 Gene3D Transferase(Phosphotransferase) domain 1 180 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00120 Phco-Chr11 780630 784247 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco11g00120 Pkinase 1.6e-71 CL0016