Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00119 ATGGCTAGTTTCATTAGAAGAATTGAAGCGGCGATTAAGAGTAGTAGTGATTCAATTTTGGGAAAAGGAGAATGCCGCGTCCGTGGATTTGGTTCGGAAGTGGACAGTGGCATAAGGAGTAGGACTGCGACAAATTCGGAAATATCCTCTGTCCATGGATACGGTTGGGCAGTGGAGAATGGCATCAAGAGTACCACTGCGCCAAATTTGGAAACACAGGACAGTGTTCATAGTTTTGGTTGGGTGGTGGATAATGCAATGAAGAGTACGGTTGCGCCAAATCCCCCTCCTCTCCACGGTTTCGCTTCGGCAGTGGATAATGGCATTAGCAGTAACGTTGGTGCCGAAGCTGAGGCCGAAGCTGAAACTGATGCAGAAGCTGAAACGGAAGAGTCGGCGAACAGAGAGATGTCTATGGGGTCATGGCAGAAGGGGTACTTGTTAGGGCAGGGCTCCTTCGGCACCGTCTACGAAGGCGTCTCAGAAGATGGATTTTTTTTTGCTGTAAAGGAGGTGTCTTTGCTGAATGATAGAAGCCATGGCAAACAGAGCATTTTCCAACTTCAGCAGGAAAGAACTCTTTTGAGTCAGTTCCGCCATGACAATATCGTTCAATATCTAGGCACGGACAAGGACAATGATAAACAGTATATCTTCCTTGAGCTTGCAGCAAAAGGATCATTAGCAGATCTCTACAAAAAGTATTGTTTAATTGACTCTGAAGTTTCTGCATATACTAAGCAAATTTTAAGTTGCTTGAAGTATCTTCATGATCGTAATGTGATTCACAGGGACATCAAGTGTGCCAATATACTGGTTGATGCAACCGGGTCCGTCAAGCTTGCAGATTTTGGTTTGGCAAAGGTTACGAAGTTAAATGATGTTAATTCAATTGGAGGTTCCCTGTACTGGATGGCCCCTGAGGTTGTTAATTTGAGGAGTCGTGGATATGGGCTAGCAGCTGATATATGGAGCTTAGGATGTACAGTATTAGAGATGTTGATACGACAACCTCCTTACTCTCATTTGGAACCAAAGCAAGCAGTACTTCGAATTGGCAAGGGTGAACTTCCACTTATTCCAGAATCGCTATCAACATATGCCCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAATGAACGACCAATTGCTGCTCAACTATTGGAGCATCCATTTATAAATACATTCCAACAAAAATCGAATCTAAGTGAGCAAACATGGCAAGACTCAGTTGGTGGTGAATGCCTAAGTCGTATACTAGTTGAGCTTTTTCTTTTGGAGAAAGCACAGAATGGAAGAAGGTTTTACCAACAGTTGGATCTCCAATTGTTATCTATCCTAATCATGGTCCTACCCCCAAACTGGGAAACCACATGCAGATCACTCCATGTTGGAAAGATTGCTGAAGAAAAGGCTGGAAGTGACACAAAAGTTGACAACCAGAAATCAATCGAAGAAATTTCTAGGAAAGAGGTATTGGGTGCGAAAGGGCCTATGATATCAAAATAA 1515 0.431 MASFIRRIEAAIKSSSDSILGKGECRVRGFGSEVDSGIRSRTATNSEISSVHGYGWAVENGIKSTTAPNLETQDSVHSFGWVVDNAMKSTVAPNPPPLHGFASAVDNGISSNVGAEAEAEAETDAEAETEESANREMSMGSWQKGYLLGQGSFGTVYEGVSEDGFFFAVKEVSLLNDRSHGKQSIFQLQQERTLLSQFRHDNIVQYLGTDKDNDKQYIFLELAAKGSLADLYKKYCLIDSEVSAYTKQILSCLKYLHDRNVIHRDIKCANILVDATGSVKLADFGLAKVTKLNDVNSIGGSLYWMAPEVVNLRSRGYGLAADIWSLGCTVLEMLIRQPPYSHLEPKQAVLRIGKGELPLIPESLSTYARDFILKCLQVNPNERPIAAQLLEHPFINTFQQKSNLSEQTWQDSVGGECLSRILVELFLLEKAQNGRRFYQQLDLQLLSILIMVLPPNWETTCRSLHVGKIAEEKAGSDTKVDNQKSIEEISRKEVLGAKGPMISK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00119 504 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 115 407 - -
Phco11g00119 504 ProSiteProfiles Protein kinase domain profile. 142 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00119 504 Pfam Protein kinase domain 144 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00119 504 MobiDBLite consensus disorder prediction 114 138 - -
Phco11g00119 504 ProSitePatterns Protein kinases ATP-binding region signature. 148 170 IPR017441 GO:0005524
Phco11g00119 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Phco11g00119 504 SUPERFAMILY Protein kinase-like (PK-like) 139 406 IPR011009 -
Phco11g00119 504 Gene3D Transferase(Phosphotransferase) domain 1 226 416 - -
Phco11g00119 504 Gene3D Phosphorylase Kinase; domain 1 117 223 - -
Phco11g00119 504 SMART serkin_6 142 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00119 504 FunFam Mitogen-activated protein kinase 1, putative, expressed 140 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00119 Phco-Chr11 772897 778852 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco11g00119 Pkinase 2.2e-64 CL0016