Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00112 ATGACAAGTTTCATTAGAAGATATGAAGCGGCCATTAATAGTAGTAGTGATTCAATTTTGGGAAAAGGAGAATACCGCGTCCGTGGATTTGGTTCGGCGGTGGACAGTGGCATAAGGAGTAGGACTGCGTCAAATTCGGAGATATCCTCTGTCCATGGATACGGTTGGGCAGTGGAGAATGGCATCAAGAGTACCACTGTGCCAAATTTGGAAACACAGGACAGTGTTCATAGTTTTGGTTGGGCGGTGGATAATGCAATGAAGAGTACGGTTGCGCCAAATCCCCCTCCTCTCCACGGTTTCGCTTCCGCAGTGGATAATGCCATTAGCAGCAACGTTGGTGCCGAAGCTGAAACTGATGCAGAAGCTGAAACGGAAGATTCCGCTAACAGAGAGAGGTGTATGGGGTCATGGCAGAAGGGGTACATGTTAGGGAAGGGCTCCTTCGGCACCGTCTACGAAGCTTTCGCTGATCATGGGAACTTTTTTGCTGCAAAGGAGGTGTCCTTGCTGGATGAGAGAAGCCAGGGCAAACAGAGTATTTTCCAACTTCGACAGGAAATATCTCTTTTGAGTCAGTTCCGGCATGACAACATCGTTCAATATCTAGGCACAGGCAAGGATAATGATAAGTTGTATATCTTCCTCGAGCTTGTAACAAATGGATCATTAGCAAATCTCTATAAAAAGTATCGTTTAATGGACTCCCAAGTTTCTGCATATACAAGGCAAATTTTAAGTGGCTTGAAGTATCTTCATGACCTTAATGTGATTCACAGGGACATCAAGTGTGCCAATATACTGGTTAATGCAACCGGGTCCGTCAAGCTTGCAGATTTTGGTTTGGCAAAGGTTACGAAGTTAAATAATGTTAATTCAGTTGGAGGCTCTCTTTACTGGATGGCCCCTGAGGTTCTTAACTTGAGGAGCCGTGGATATGGGCTAGCAGCTGATATATGGAGCTTAGGATGTACAGTATTAGAGATGTTAACACGACAACCTCCTTACTCTCATTTGAAACTAAGGCAAGCCATATTTCAAATTGGCGGTGGTGAACCTCCACTTGTTCCAGAATCAGTGTCAACAATTGCCCGAGATTTCATTCTTAAATGCTTACAAGCTCATCCAAACAAACGACCAACTGCTGCTCAACTATTGAACCATCCATTTGTAAACATTGGCACCATCAAGAATGGAGACCAGAACAAAGATATAGACGGTGACCGGGAGAATGTCATTGACATCAATATCAAATTTGACCTCAATTTGGAGAACTCCACAAGGTGCAGGAGGGATCCCATCCAGGCAAAAGCTATCAAGTGA 1323 0.4437 MTSFIRRYEAAINSSSDSILGKGEYRVRGFGSAVDSGIRSRTASNSEISSVHGYGWAVENGIKSTTVPNLETQDSVHSFGWAVDNAMKSTVAPNPPPLHGFASAVDNAISSNVGAEAETDAEAETEDSANRERCMGSWQKGYMLGKGSFGTVYEAFADHGNFFAAKEVSLLDERSQGKQSIFQLRQEISLLSQFRHDNIVQYLGTGKDNDKLYIFLELVTNGSLANLYKKYRLMDSQVSAYTRQILSGLKYLHDLNVIHRDIKCANILVNATGSVKLADFGLAKVTKLNNVNSVGGSLYWMAPEVLNLRSRGYGLAADIWSLGCTVLEMLTRQPPYSHLKLRQAIFQIGGGEPPLVPESVSTIARDFILKCLQAHPNKRPTAAQLLNHPFVNIGTIKNGDQNKDIDGDRENVIDINIKFDLNLENSTRCRRDPIQAKAIK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00112 440 MobiDBLite consensus disorder prediction 113 132 - -
Phco11g00112 440 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
Phco11g00112 440 SUPERFAMILY Protein kinase-like (PK-like) 135 392 IPR011009 -
Phco11g00112 440 SMART serkin_6 138 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00112 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Phco11g00112 440 ProSiteProfiles Protein kinase domain profile. 138 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00112 440 Pfam Protein kinase domain 140 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00112 440 Gene3D Transferase(Phosphotransferase) domain 1 137 417 - -
Phco11g00112 440 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 111 398 - -
Phco11g00112 440 FunFam Mitogen-activated protein kinase 1, putative, expressed 136 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00112 Phco-Chr11 725692 730131 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco11g00112 Pkinase 1.5e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00112 11 725692 730131 Phco4g02321 4 44259170 44263840 PCT