Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00071 ATGGAGAAATACGAGCTCGTCAAGGATATAGGATCTGGGAATTTTGGGGTGGCTAGGCTCATGCGTAACAGAGACACCAAGGAGCTTGTTGCCATGAAATACATTGAAAGGGGTTACAAGATTGATGAGAATGTTGCGAGGGAAATCATAAACCATAGAAGTCTTCGCCACCACAATATTATTCGGTTCAAGGAGGTGGTTTTGACTCCCACACATCTGGGTATTGTTATGGAGTATGCAGCTGGTGGAGAGCTCTTTGAGAGGATTTGCAGTGCTGGAAGATTCAGTGAAGATGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGCAAATCTGTCATCGAGACTTGAAGCTTGAGAACACCTTATTGGATGGCAGCCCTGCCCCAAGGCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCAAGGCCTAAGTCAACTGTGGGAACCCCAGCCTACATTGCGCCTGAGGTTCTTTCACGTAGAGAATATGATGGAAAGCTAGCTGATGTATGGTCCTGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAAGACCAAGACGATCCCAAAAATTTTAGGAAAACCATCACTAGAATTATGGCTGTTCAATACAAGATCCCTGACTATGTTCACATATCTCAAGACTGCAGACATCTGCTATCTCGCATTTTTGTGGCAAATGCAGCTAGGAGAATCACTATCAAGGAAATCAAGTCCCATCCATGGTTTTTAAAGAACTTGCCTAGAGAATTAACAGAAGTAGCTCAAGCTGCATACTACAGAAAAGAAAATCCAACCTTTTCTCTTCAGAGTATAGAAGACATCATGAATATTGTTGAGGAGGCCAAAGTTCCACTTCCGGCATCCAGGTCGATTGGAGGATTTGGTTGGGGAGGAGAAGAAGATGAAGATGAAACAAAAGAAGCAGAGATTGAGGCTGAAGAAGATGAGTATGAAAAAAGAGTCAAAGAAGCACGAGCAAGCGGGGAATTTCATGTTAGTTAA 1056 0.4299 MEKYELVKDIGSGNFGVARLMRNRDTKELVAMKYIERGYKIDENVAREIINHRSLRHHNIIRFKEVVLTPTHLGIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTITRIMAVQYKIPDYVHISQDCRHLLSRIFVANAARRITIKEIKSHPWFLKNLPRELTEVAQAAYYRKENPTFSLQSIEDIMNIVEEAKVPLPASRSIGGFGWGGEEDEDETKEAEIEAEEDEYEKRVKEARASGEFHVS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00071 351 SUPERFAMILY Protein kinase-like (PK-like) 1 297 IPR011009 -
Phco11g00071 351 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Phco11g00071 351 MobiDBLite consensus disorder prediction 310 351 - -
Phco11g00071 351 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00071 351 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00071 351 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Phco11g00071 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Phco11g00071 351 MobiDBLite consensus disorder prediction 331 351 - -
Phco11g00071 351 CDD STKc_SnRK2 3 259 - -
Phco11g00071 351 MobiDBLite consensus disorder prediction 315 330 - -
Phco11g00071 351 Coils Coil 325 345 - -
Phco11g00071 351 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Phco11g00071 351 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Phco11g00071 351 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00071 351 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Phco11g00071 351 PANTHER SERINE/THREONINE KINASE 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00071 Phco-Chr11 430752 433351 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Phco11g00071 Pkinase 4e-70 CL0016