Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00057 ATGGAAGAGTTTGAGTATGAAGAGGTTGTAAAAGCAACAGAAAACTTCAACCCTAGAAGGATCGTAGGGAAAGGAAGCCATGGCATGGTGTACAAAGGCGTTGTTCAATTCAAAGAGAACAACAGCTACAGATTGGTCGCTGTAAAGAAGCCATCACAAGGCCTTCTATCTCTTCACGACAACTCCAAACTCGAAAACGAAATCCGAGTTCTTTCCTCTCTACCCGAAAACCCTCACGTGGTTAATCTTCTAGGAACCACGGGTGGTGATGATCACAGCCACAAACTCATTGTGATGGAGTTCATGCCCAATGCCTCTCTCCATGACTTGCTTCATTCCAACGAAACCCCACCCACGTGGCCTAAACGCGTTGAAATCGCCATGCAAATCGCTCGTGCGGTGCAGTTTCTTCACCAAGTTAAGCCTGTGGTGATTCACAGAGACATCAAACCCACCAACATATTGTTTGATTCAAGTTGGAATGCGAAGTTGGCAGATTTTGGACTGGCGGTGAGAGGGGTTGACCCGGTGAGTCAACCCGCTGGGACAATAGGGTACTTGGACCCGTGTTACACCACCCCAGATAGACTCAGCACAAAAAACGACATTTTCAGCTTTGGGGTTGTGTTGTTGGAGATCATAAGTGGTAGAAAGGCCATTGATGCGTGCAAAACGCCGGCTTCTGTTGTGGAATGGGCGATTAAGTTAATGGATGAACAAGTTTTGAAAGAGATTTGTGACGCCAGAGTGGCACTGCCAGGTTACATGGTTGGAACAATCACTCGCTTGTTACGCTATGCTTCACGTTGTGTGTCACAAAATGAAGATGAACGTCCCTCAGCTGCTGAAGTTGTTATGGGAATGGAAAGTTGTCTGGTGAAACGAGTCAGGCTCCCCGTTTGGACGTGCGTTTTGAAGGGGTTGGTTTGGTTGAGAAAGAGGAAGCTGATGATGAGTATTGCTTGGCAAACTCAGACACGAATTCGGTGTATAGCAGAAGAAGAGGGTGAGGTAGACGGTGTTATTGTTGGTGTCCCAAGTGGGAAGATATCCATGACCATTAAGGAGGTTTTGGCTGATGTTACATTGGAATGA 1095 0.4676 MEEFEYEEVVKATENFNPRRIVGKGSHGMVYKGVVQFKENNSYRLVAVKKPSQGLLSLHDNSKLENEIRVLSSLPENPHVVNLLGTTGGDDHSHKLIVMEFMPNASLHDLLHSNETPPTWPKRVEIAMQIARAVQFLHQVKPVVIHRDIKPTNILFDSSWNAKLADFGLAVRGVDPVSQPAGTIGYLDPCYTTPDRLSTKNDIFSFGVVLLEIISGRKAIDACKTPASVVEWAIKLMDEQVLKEICDARVALPGYMVGTITRLLRYASRCVSQNEDERPSAAEVVMGMESCLVKRVRLPVWTCVLKGLVWLRKRKLMMSIAWQTQTRIRCIAEEEGEVDGVIVGVPSGKISMTIKEVLADVTLE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00057 364 Gene3D Phosphorylase Kinase; domain 1 1 101 - -
Phco11g00057 364 PANTHER OS01G0253100 PROTEIN 2 289 - -
Phco11g00057 364 SUPERFAMILY Protein kinase-like (PK-like) 3 304 IPR011009 -
Phco11g00057 364 SMART serkin_6 16 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00057 364 ProSiteProfiles Protein kinase domain profile. 16 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00057 364 Pfam Protein tyrosine and serine/threonine kinase 20 285 IPR001245 GO:0004672|GO:0006468
Phco11g00057 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Phco11g00057 364 FunFam Serine/threonine-protein kinase-like protein At5g23170 102 298 - -
Phco11g00057 364 Gene3D Transferase(Phosphotransferase) domain 1 102 297 - -
Phco11g00057 364 ProSitePatterns Protein kinases ATP-binding region signature. 22 50 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00057 Phco-Chr11 371428 372522 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Phco11g00057 PK_Tyr_Ser-Thr 6.7e-38 CL0016