Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00036 ATGCTCGAGATGAGATTGAGAGACCACGACGACGATAGAGATAGCGAGCCTGACATCATTGACGGTGTGGGTGCTGAGACTGGGCACGTGATAAGAACTAGTATTGGTGGCAGAAATGGTCAATCTAAGCAGAATGTCAGTTATATTGCAGAACATGTGGTGGGAACAGGCTCTTTTGGTGTTGTTTTTCAGGCAAAATGCAGAGAAACTGGAGAGATTGTGGCCATCAAGAAGGTTCTCCAGGACAAGCGCTACAAGAATAGGGAGTTACAAATTATGCAAATGCTGGATCACCCAAATATTGTTGCCCTACGGCATTGTTTCTTCTCAACAACTGACAAAGAAGAAGTTTACTTGAATCTTGTCCTTGAATATGTTCCTGAAACTGTGAATCGCATCGCGAGGAGCTATAGCAGGATTAACCAGCGAATGCCTTTGATATATGTAAAGCTTTATACCTACCAGATTTGCAGGGCCCTTGCTTATATACATAACTGCATTGGTATATGTCACCGTGACATCAAACCTCAGAACCTACTTGTGAACCCGCATACTCATCAGCTGAAACTATGTGATTTTGGTAGTGCAAAAGTGTTGGTAAAAGGAGAACCAAATGTTTCTTACATCTGTTCAAGATACTACCGTGCTCCAGAACTTATATTTGGGGCCACCGAATATACAACTGCCATAGACATATGGTCAACTGGTTGCGTAATGGCTGAATTACTTCTTGGACAGCCCTTGTTTCCTGGGGAGAGTGGAGTTGATCAGTTAGTTGAAATCATCAAGGTTTTGGGAACTCCAACTAGGGAGGAGATAAAGTGCATGAACCCTAATTATACTGAATTTAAGTTTCCACAGATAAAACCTCATCCATGGCACAAGGTCTTTCAGAAACGTCTACCACCAGAAGCAGTGGACCTTGTCTGTAGGTTCTTTCAGTACTCTCCCAATTTGAGATGCACTGCGTTGGAGGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAGCACCCGTCTTCCTAACGGTCGACCACTTCCTCCACTGTTTAATTTTAAATCTCAGGAACTTTCTGGCATACCCCCTGATGTCATCAATCTTCTTATTCCAGAGCATGCGCGTAAACAGAACTTATTTATGGCTTTGCACACTTAG 1161 0.4298 MLEMRLRDHDDDRDSEPDIIDGVGAETGHVIRTSIGGRNGQSKQNVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALRHCFFSTTDKEEVYLNLVLEYVPETVNRIARSYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPSTRLPNGRPLPPLFNFKSQELSGIPPDVINLLIPEHARKQNLFMALHT 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00036 386 MobiDBLite consensus disorder prediction 1 20 - -
Phco11g00036 386 ProSitePatterns Protein kinases ATP-binding region signature. 54 78 IPR017441 GO:0005524
Phco11g00036 386 Gene3D Transferase(Phosphotransferase) domain 1 128 376 - -
Phco11g00036 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Phco11g00036 386 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 17 378 - -
Phco11g00036 386 SMART serkin_6 48 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00036 386 Pfam Protein kinase domain 50 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g00036 386 Gene3D Phosphorylase Kinase; domain 1 33 127 - -
Phco11g00036 386 FunFam Shaggy-related protein kinase kappa 128 376 - -
Phco11g00036 386 FunFam Glycogen synthase kinase-3 beta 32 127 - -
Phco11g00036 386 CDD STKc_GSK3 43 335 IPR039192 -
Phco11g00036 386 SUPERFAMILY Protein kinase-like (PK-like) 47 359 IPR011009 -
Phco11g00036 386 MobiDBLite consensus disorder prediction 1 22 - -
Phco11g00036 386 ProSiteProfiles Protein kinase domain profile. 48 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00036 Phco-Chr11 228265 233377 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Phco11g00036 Pkinase 1.1e-64 CL0016