Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco113g00003 ATGCATTTGTCACCTCATATTGCCACTCTTTGTTATATTATCAGAGTTCCTTCTTCACCTTATGAAAAAGACATGGCTTCATTTAACTTCTTCATTTTGCACCTAACCTTCTTTTCCCTCTTTCTTCCTTGCTCCCCTTCTCCTATCACCCAAGGTGCTTTGGACGGAGGTTCAAAAGCTTTCTATAACTGCACAAGGAACAGCACTTTTGCTTCCTATAGCGTGGCTTACCGTTCTAACGTCAAAACACTCCTAGATTGGCTCTCCTCCAATGTCACTAACAATACCAGATTCTACAACACCACAGTAGCTAGCAGACACACAGCAGACACTGCCTATGGTAGCTTCCTTTGTACAATAGTCAACAACCCTGAAATCTGCCAACGATGCGTGAAGGAAGCTGCCAAACTTATATCATCGCTTTGCACCATTGCAAAAGAGGCTATCATATGGTACGAACTGTGCTATGTGCGCTACTCTGATCGTCGTTTCTTCTCCACTGTGGAGGAGAGTCCTAAACTCTCCTTTATGAATGATCAGGACTACGTGGGTGACGTTGGGCGCTTCAACAATATTGTGTGGGATATGCTGAACGATTTGAGAAGTGAGGCAGCAAGTGCTTCTAGTAAAAGCGCTGATAAGTCTGTGAACATCACGGATAACCAAAAGTCGTATGGCTATGCTTGGTGCCTACCATACCTGACCAAAGAGAACTGCAGCTGGTGTCTTAGCGATGCCATAGCAGACATTCCAACCGGTTGCTGCAGAGGAAAATCTGGGGGACACATAATATTTCCTAGTTGTGGTGTTAGATACGAATTATTTCCATTCCATATGGCACATGTAAATAGTGGTTGGGAGTCTCCGCCACCATTTCCCGACAGTCCTCCACCTTTTGCTTCACCAGGGAAAAGAAAGCAGAAGACACTAACAATAATTGTGACTGTTGTTCCAATTGTTGTTTCACTGGTGCTTTTATCCTTGGGCTGCAGTTGTTTTCTACGTAGGAAAGAAACAAAGAATCGGCATGACATTCTCAAAGAAAGCTTTGGGAATGACAGTACCACTTTGGAGTCCTTGAGATTTGAATTAGCGAAAATTGAAGCTGCGACAAATAGATTTGCTAAAGAAAACATGATAGGCAAAGGCGGATTTGGAGAGGTCTATAGGGGTATTCTTTCTGATGGACAAGAAATAGCTGTGAAGAGGCTTACAGGAAGCTCTCGGCAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAGCTTCAACATAGAAATTTAGTGAGATTACTAGGATTTTGCTTAGAAGATGATGAAAAGATACTCATTTACGAGTACGTGAAAAACAAGAGTCTTGATTACTTTTTATCAGATATCAAGAAGCGAACACTTTTATCTTGGTCTGAACGACAGAAGATTATAAGAGGAATTGCACGAGGCATTTTATATCTACATGAAGATTCTTGCCTAAAAATAATACATCGTGATCTTAAACCTAGTAATGTTTTATTAGATAGTAATATGAATCCAAAGATTTCAGATTTTGGTATGGCTAGAATTGTTGCTGGAGATGAAATTGAAGAAAGTACAGGCAGAATCGTAGGAACTGGTTATATGCCCCCTGAGTATGCAATGCATGGACAATTTTCTGTGAAATCTGATGTATTTAGTTTTGGAGTTATGGTTCTAGAGATTATTAATGGAAAGAGAAAATGTTGTTCATCTGAAGCAGAGGTTATTGATGACATTCGAAGACATGCTTGGGCAAAATGGACAAAGGAAACACCACTAGAACTATTGGATCCTCATGTAGGAGGACCTTATTCTTGCGAAGAAGTCATCAAATATATCCACATTGGTTTGTTGTGTGTTCAGGAAGATCCAAATGACAGACCTACAATGGCAACAATTGTGTTTTACCTCAACAACCACTCAATCAATTTGCCTTCCCCTCATCAACCAGGATATTTTAAGAGTAATAGAAAAGACAACATGGCTACCAATAAGGAATTGGATAATATCACTGATTCCATCAATGAAATTTCTCTAACTAAATTCTTTCCTCGATAA 2079 0.4002 MHLSPHIATLCYIIRVPSSPYEKDMASFNFFILHLTFFSLFLPCSPSPITQGALDGGSKAFYNCTRNSTFASYSVAYRSNVKTLLDWLSSNVTNNTRFYNTTVASRHTADTAYGSFLCTIVNNPEICQRCVKEAAKLISSLCTIAKEAIIWYELCYVRYSDRRFFSTVEESPKLSFMNDQDYVGDVGRFNNIVWDMLNDLRSEAASASSKSADKSVNITDNQKSYGYAWCLPYLTKENCSWCLSDAIADIPTGCCRGKSGGHIIFPSCGVRYELFPFHMAHVNSGWESPPPFPDSPPPFASPGKRKQKTLTIIVTVVPIVVSLVLLSLGCSCFLRRKETKNRHDILKESFGNDSTTLESLRFELAKIEAATNRFAKENMIGKGGFGEVYRGILSDGQEIAVKRLTGSSRQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEDDEKILIYEYVKNKSLDYFLSDIKKRTLLSWSERQKIIRGIARGILYLHEDSCLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVAGDEIEESTGRIVGTGYMPPEYAMHGQFSVKSDVFSFGVMVLEIINGKRKCCSSEAEVIDDIRRHAWAKWTKETPLELLDPHVGGPYSCEEVIKYIHIGLLCVQEDPNDRPTMATIVFYLNNHSINLPSPHQPGYFKSNRKDNMATNKELDNITDSINEISLTKFFPR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco113g00003 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Phco113g00003 692 Gene3D Phosphorylase Kinase; domain 1 335 449 - -
Phco113g00003 692 Pfam Protein kinase domain 375 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco113g00003 692 ProSiteProfiles Gnk2-homologous domain profile. 58 164 IPR002902 -
Phco113g00003 692 CDD STKc_IRAK 380 646 - -
Phco113g00003 692 FunFam cysteine-rich receptor-like protein kinase 10 450 651 - -
Phco113g00003 692 SMART serkin_6 374 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco113g00003 692 Pfam Salt stress response/antifungal 64 161 IPR002902 -
Phco113g00003 692 Pfam Salt stress response/antifungal 185 273 IPR002902 -
Phco113g00003 692 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Phco113g00003 692 Gene3D Transferase(Phosphotransferase) domain 1 450 653 - -
Phco113g00003 692 Gene3D - 173 277 IPR038408 -
Phco113g00003 692 Gene3D - 58 164 IPR038408 -
Phco113g00003 692 SUPERFAMILY Protein kinase-like (PK-like) 357 668 IPR011009 -
Phco113g00003 692 ProSiteProfiles Gnk2-homologous domain profile. 170 277 IPR002902 -
Phco113g00003 692 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 62 684 - -
Phco113g00003 692 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 335 449 - -
Phco113g00003 692 ProSiteProfiles Protein kinase domain profile. 374 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco113g00003 Pkinase 9.4e-49 CL0016