Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g02064 ATGATCATGAATTGGAAGAGAAGGGCATACAAATTAGTTTTAGTTGACTCCAATGGGACTAGGTTAGAAGCAGGAAGTGAATTGAAAAGAAAAAGGAAGAAAAATGGAGAGGGTGTGGTGTGGAATGGAATCTCCAAATTGCAAGGTTTGTGTTGGGTTTGGATTTGGATGGATAAAGTTTGTCTGAACAGTGAAGGTGTGGGAGATGAAGAAGGCGAGAGTAATGTTGATGTCGATGTCCCTGTTGCTCCTGTGGTTGGGATGGAATTTGAGAGTTACGAGGATGTCTATTACTTCTATAATTGGTATGCCAAGGAACAGGGATTTGGGGTTAGGGTCACAAATACCTGGTACCGCAAGACTAAGGAACGTTACAGGGCAAAACTTAGCTGCAGCAGCGCAGGCTTCAAGAAAAGAACCGAAGCTAATCGCCCCAGACCCGAAACCAGAACTGGTTGTCCTGCTATGATCAAGTTCAGGTTGATGGATTCCACAAGATGGAGAATTATTGAAGTTGAGCTTGACCACAACCACTTGATTAACCCCACCAGTGGCAAGTTTTACAAGTCCCATAAGCAAGTTGCTCTTGGCACCAAAAGAACCTTCCACTTAGATGCTGCTGCTGCTCAACAGGTTCACAAAATTAGGATGTTTCGAACTGTCATAATCGATGCTGAGGATGATGCTAGTGTACATCCTGATGAAGGGGAATCCCCAAAAGGCCTCTACTCCAACAGTCAGTTGAAGCTGAAGAAAGGTGATGCTGAAGCAATTTTGAACTTTTTCAGTCACCAGCAATTGGCAGGTCCAGACTTCTTCTATGTGGTCGATGTCAATGAGAGGGGATGTTTCAGGAATTTGTTCTGGGCTGATGCAAAGTCCAGGGTGGCATACAGTTATTTTAGTGATGTTGTAGCCATTGACACAGCATGTTTGAACGGTGCATATCAAGTTCCCCTGGTTATGTTCCTTGGGATAAACCACCATAAACAATCTATCTTGTTTGGGTGTGGACTGCTTGCTAGTGATACGGTTGAATCATACACTTGGCTGTTCAGAGCGTGGCTTACGTGTATCTTGGGACGCCCCCCACAAGTTATCATTACTCATCAATGTGAAATCTTGCAATCTGTGGTTGCTGATGTCTTTCCAAGATCTACACACTGCCTTTGCTTGTTCAATATCATGCAAAAAGTTCCAGAAAAACTGGGAGCCTGCGTACAGCATGAAGCAATCAGTGCAGTTTTGAGCAGAGCAGTGTATTCCTCTCTAAGGGCTGAGGAATTTGAAGCAACTTGGGAGGACATGATGAAAAGCAACGAAATTAGAGGCAATAAATGGCTCCAATCTTTATATGAGGAACGGAAACGGTGGGCTCCAGTTTATCTGAAGGAAATCTTCTTGGCAGGAATATTTTCAATTCAACAAAGTGATGCTGTATCATTTTTCTTTGATGGGTACCTCGATGAACAGACTTCTCTGAAAGAATTTTTAGAAAAATATGATCAGACTTTACAGACAAAGCGACAACTTGAAGCTTTGGCAGATTTGGATTCAAAATCTTGTAGCTTTGTACCAAAATCGAGGTCTTACTTTGAGTTGCAGGTTTCAAAGTTATATACCAATGAAATACTAAGAATGTTTGAAAGGGAAGTGGAAGGGATGTTTTCTTGCTTTAACTCCAGACAGATAAATGTTGATGGACCGGTCATCACCTACATTGTGGAAGAACAAGTTGAAGCTGAGGGAAATCAGAGAGGTGCAAGAGATTATGAGGTGTGTTATAATGAAGCTGAAATGGAGGTCTTTTGCATCTGTGGTCTGTTCAATTTCAGAGGTTGGTTGTGCAGGCATGCTTTATTTATTTTGAGCCAAAATGGGATAAAAGAGATCCCAGCGCAGTACATTGTTTCACGGTGGAGAAAAGATATGAAGCGTAGCAGCGTTTATGATCACAACTGTAGTGGCATTGATATAAGTAATCCAGTTCATAGGTATGATCATTTGTACAAACAGATTGTAAAGGTTGTAGAGGAAGGTAAGAAATCTCATGATCATTACAGGACTGCACTACAAGCAATGGAGAATATATTGAGGAAGCTTCATATTCTAAACGTTGAGGATCCTCACAAACTAATGTGCAAGTATTCATGTCCGAATAACTAG 2166 0.4164 MIMNWKRRAYKLVLVDSNGTRLEAGSELKRKRKKNGEGVVWNGISKLQGLCWVWIWMDKVCLNSEGVGDEEGESNVDVDVPVAPVVGMEFESYEDVYYFYNWYAKEQGFGVRVTNTWYRKTKERYRAKLSCSSAGFKKRTEANRPRPETRTGCPAMIKFRLMDSTRWRIIEVELDHNHLINPTSGKFYKSHKQVALGTKRTFHLDAAAAQQVHKIRMFRTVIIDAEDDASVHPDEGESPKGLYSNSQLKLKKGDAEAILNFFSHQQLAGPDFFYVVDVNERGCFRNLFWADAKSRVAYSYFSDVVAIDTACLNGAYQVPLVMFLGINHHKQSILFGCGLLASDTVESYTWLFRAWLTCILGRPPQVIITHQCEILQSVVADVFPRSTHCLCLFNIMQKVPEKLGACVQHEAISAVLSRAVYSSLRAEEFEATWEDMMKSNEIRGNKWLQSLYEERKRWAPVYLKEIFLAGIFSIQQSDAVSFFFDGYLDEQTSLKEFLEKYDQTLQTKRQLEALADLDSKSCSFVPKSRSYFELQVSKLYTNEILRMFEREVEGMFSCFNSRQINVDGPVITYIVEEQVEAEGNQRGARDYEVCYNEAEMEVFCICGLFNFRGWLCRHALFILSQNGIKEIPAQYIVSRWRKDMKRSSVYDHNCSGIDISNPVHRYDHLYKQIVKVVEEGKKSHDHYRTALQAMENILRKLHILNVEDPHKLMCKYSCPNN 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g02064 721 ProSiteProfiles Zinc finger SWIM-type profile. 591 627 IPR007527 GO:0008270
Phco10g02064 721 Pfam FAR1 DNA-binding domain 99 181 IPR004330 -
Phco10g02064 721 Pfam SWIM zinc finger 598 624 IPR007527 GO:0008270
Phco10g02064 721 Pfam MULE transposase domain 304 398 IPR018289 -
Phco10g02064 721 Coils Coil 494 514 - -
Phco10g02064 721 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 702 IPR031052 GO:0006355
Phco10g02064 721 SMART 26again6 602 629 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g02064 Phco-Chr10 42177365 42181174 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco10g02064 MULE 4.9e-22 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g02064 10 42177365 42181174 Phco10g02064 10 42177365 42181174 ECH