Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g02054 ATGCCTTCAAGACCCTTCCCTCCCACAAGTCCCACCAAAACCAAGGCCCTCTTCCTAGCACTCACCGTTTCAGCTTGTGTTGTGATTTTCTGCTCAATCCTCTACTTCCTCTACCATCTGTGGCTTTCTCTAGTTCACAGGGCTAAGACCATCCCCTTTGATGCAAGTGCTCCCTTGAAGCTCCAAAGATTCTCATACAAAGATTTAAAGCAAGCCACCAATGGCTTTGACACTGCCAATGTAATTGGCAAAGGCGGCTCTGGCACTGTTTTCAGAGGCGTACTTAAAGACGGCAAGTTTATTGCCATCAAGCGCCTGGACGCATTGTCTTTGCAGTCAGAGAGAGAGTTTCAAAACGAACTGCAGATTCTTGGAGGGTTAAGGTCACCATTCTTGGTGACCCTTTTGGGTTACTGTGTGGAAAAGAACAAAAGACTGTTGGTGTATGAGTATATGCCCAACAGAAGCTTGCAGGAGTCTCTCTTTGGAGATGAGGGTTCGAGTTTGAGTTGGGAGAGCAGGTTTTGTATAATATTGGATGTTGCTAGAGCTATGGAGTTCTTGCACCTTGGATGTGATCCTCCAGTGATCCATGGTGATATCAAGCCAAGCAATGTTCTTCTTGATTCAGAGTGGCGTGGAAAGATCTCCGATTTTGGCTTGTCAAGGATTAAGGTGGAGGGTGAGTTTGGTGTTGACTTGTTTAGCCAGGACCTAGGGAGGAGCCAAGATCTATGGAAAAGCCAAGATCTTTCAGGTAACTTGACTAATTTGACTTCAGAAACTCCTGCTATTGGTACTCCAGTTGAGAGTGTCAGTGAAGTAGATTTTGCTCTAGCTTTGCAAGCCTCTTCTTCATCTAAAAATAGTAGGACTTGCTTTAATGTTAAAGCTTTGAATTTGAGTTCTTTGAATTATAATGCCAATATTTCCAGTGAAAGTGAAATCAGGAGTGTGAACGCAAAGGGTAAGGAAATTTCAGCTTTGGATAGAGATGATTGGAATGGTAAGTTTTTTCCTTGTGATGACGAGCTTTCTAGCATTGATTATAGTAAGGAGTTAACAGTGAATGCTTCTTCTTTGGTGGATGTTGAGAAGGCAAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAGACAGGATGGAAGTGGAGAGTTATGCAGTAAAGACTATGTTATGGAGTGGATTGGGAGTCAGATTTGTCCATCGAACCCTGATTGGGATCATGGTAAGAACAATGTTCACGAGAAAGTAGAGTTAGAAACTTCAAGTCCAAAGGATAAAGACCAAGATGCAATTGCACCCCAATCACAGGTGTTTGGAATAGGAAACAATACTACAGATAATGGGATTGAGAAAAAAGAGTCAAAGGGAAAGAAAAATCAGAAAAAAAAACACAGGAAGATGCAAGAGTGGTGGAGAGAAGAGCATCTCGCTGAATTAAGCAAGAAGACAAATAAACTGAAAAATCTTCACACTAAATGGAAGAAAGGCATGAAAGTGCCCCATTTTGATTTGGGTAGAAGGTTCTATATTTGCAAACGTAAGAAGTTTGGAGAGGAGGTTGAGGATGAATGTGATCAAAATGGGGAGTTTAGCTTCAGAAGAGGCTGGAAGAAAAAAAGTACTCGTTCCATTGGTAGTGACATGTGGAGTGGAGATATTTTCAGCCGCGAGCTCAGCAGCACAACTAGCATGAGGGGGACACTCTGTTATGTGGCACCAGAATATGGAGGGTGTGGATTCTTGATGGAGAAAGCTGATATTTATAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCAGGTAGGAGACCGTTACATGTTCTTGCATCACCCATGAAGCTAGAGAAAGCTAACCTAATAAGCTGGTGTAGACACTTGGCTCAAGCTGGTAACATTTTAGAACTTGTGGATGAGAGATTGAAAGAAGATTTCAACAAGGACCAAGCAAGCCTGTGTATCAATTTGGCACTCACTTGCTTACAGAAAATTCCTGAGTTGAGGCTGGATATTGGGGATATTGTTAAGATTTTGAAGAGGGAGATGGATCTTCCACCACTTCCATTTGAGCTCTCCCCTTCTCCACCTTCCAAATTATACGGCAAATCAAGGAGAAAACAGAAGAGCACTGCAGAATAG 2139 0.424 MPSRPFPPTSPTKTKALFLALTVSACVVIFCSILYFLYHLWLSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDTANVIGKGGSGTVFRGVLKDGKFIAIKRLDALSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRLLVYEYMPNRSLQESLFGDEGSSLSWESRFCIILDVARAMEFLHLGCDPPVIHGDIKPSNVLLDSEWRGKISDFGLSRIKVEGEFGVDLFSQDLGRSQDLWKSQDLSGNLTNLTSETPAIGTPVESVSEVDFALALQASSSSKNSRTCFNVKALNLSSLNYNANISSESEIRSVNAKGKEISALDRDDWNGKFFPCDDELSSIDYSKELTVNASSLVDVEKANGKQWGKDWWWRQDGSGELCSKDYVMEWIGSQICPSNPDWDHGKNNVHEKVELETSSPKDKDQDAIAPQSQVFGIGNNTTDNGIEKKESKGKKNQKKKHRKMQEWWREEHLAELSKKTNKLKNLHTKWKKGMKVPHFDLGRRFYICKRKKFGEEVEDECDQNGEFSFRRGWKKKSTRSIGSDMWSGDIFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKEDFNKDQASLCINLALTCLQKIPELRLDIGDIVKILKREMDLPPLPFELSPSPPSKLYGKSRRKQKSTAE 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g02054 712 Coils Coil 474 494 - -
Phco10g02054 712 ProSiteProfiles Protein kinase domain profile. 76 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g02054 712 FunFam Receptor-like serine/threonine-protein kinase At4g25390 535 684 - -
Phco10g02054 712 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Phco10g02054 712 PANTHER OS07G0586332 PROTEIN 10 707 IPR044576 -
Phco10g02054 712 SMART serkin_6 76 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g02054 712 Gene3D Transferase(Phosphotransferase) domain 1 539 684 - -
Phco10g02054 712 Gene3D Transferase(Phosphotransferase) domain 1 152 268 - -
Phco10g02054 712 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Phco10g02054 712 FunFam Receptor-like serine/threonine-protein kinase At4g25390 45 151 - -
Phco10g02054 712 Pfam Protein kinase domain 78 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g02054 712 FunFam putative receptor-like protein kinase At1g80870 152 263 - -
Phco10g02054 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Phco10g02054 712 SUPERFAMILY Protein kinase-like (PK-like) 56 696 IPR011009 -
Phco10g02054 712 Gene3D Phosphorylase Kinase; domain 1 45 151 - -
Phco10g02054 712 MobiDBLite consensus disorder prediction 417 471 - -
Phco10g02054 712 MobiDBLite consensus disorder prediction 688 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g02054 Phco-Chr10 42131039 42133177 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Phco10g02054 Pkinase 6.8e-28 CL0016