Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g02043 ATGGATCGCGGATCCAATGGCACGGGAACGGGCACGGGTAGCAGCAGGAACATCCTGTTCAACAAGTACGAGATAGGGAAGATGCTGGGGCAGGGGAACTTCGCCAAAGTGTACCACGGGAGAAATCTGAGCACGAACGAGAGCGTGGCCGTCAAGGTCATAAAAAAAGAGAGGCTTCAGAAGGATAAGCTGGTGAAACAGATCAAACGCGAGGTCTCCGTCATGCGCTTGGTGCGTCACCCCCACATCGTGGAGCTCACAGAGGTTATGGCCAACAAAGCCAAAATCTTCATGGTCGTCGAGTACGTCAAGGGAGGAGAACTCTTCGCCAAGGTGGCCAAGGGAAAGATGAAGGAAAACATCGCCCGAAAGTACTTTCAACAGCTCATCAGCGCCGTCGACTTCTGCCACAGCCGTGGCGTCACCCACCGTGATTTGAAGCCGGAGAATCTTCTCCTCGACGAGAACGAAGATCTCAAAGTCTCAGACTTCGGCTTGTCGGCGCTGCCGGACCAGCGCAGATCCGACGGGATGCTCGTTACGCCGTGCGGCACGCCGGCCTACGTGGCGCCGGAGGTTCTGAAAAAGAAGGGCTACGATGGGTCGAAGGCTGATATATGGTCGTGTGGGGTGATCCTCTTCGCTCTTCTTTCAGGGTATTTACCCTTTCAGGGTGAGAATGTGATGAGGATTTACAGCAAGTCTTTCAAAGCTGATTATGCATTCCCGGAATGGATTTCACCTGGGGCCAAACGCTTGATCTCTAATTTGCTGGTTGTGGACCCACAGAAGAGGTATTCCATCGCTGACATCATGAAGGATCCTTGGTTCCAAGTTGGGTTCATGCGCCCCATTGCGTTTTCCATGAAGGAGACGGCTCTGGAGGATAACATTGACTTCAACGGGGACGAAGATGGTAACGAAGATGGTAACGGCAGCAACAACCATCGTGGGGAGCTGGTCGGCGCCCAGCCCGCTCGTCCGTCTTACAATGCTTTTGAGATAATATCCTCGTTGTCGCACGGGTTTGATCTGAGGAATTTGTTCGAGACAAGGAAGCGGTCGCCGTCGATGTTCATATCGAAGCACTCGGCGTCGACGGTGATGGCGAAGCTGGAGGCGGTGGCGAAGAAGCTGAACTTTAGGGTGACGGGGAAGAAGGAGTTCACGGTGAGGATGCAGGGGGCGACGGAAGGGAGGAAGGGGAAGCTGGGGATGACAATGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTCTCGAAGTCAGCCGGAGACACTCTTGAATACATAAAGCTGTGTGAGGAAGAGGTGAGGCCTTCGCTCAAAGACATTGTGTGGAGTTGGCAAGGGGACTGCAACTCCCACCAGTGA 1380 0.5442 MDRGSNGTGTGTGSSRNILFNKYEIGKMLGQGNFAKVYHGRNLSTNESVAVKVIKKERLQKDKLVKQIKREVSVMRLVRHPHIVELTEVMANKAKIFMVVEYVKGGELFAKVAKGKMKENIARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPDQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLSGYLPFQGENVMRIYSKSFKADYAFPEWISPGAKRLISNLLVVDPQKRYSIADIMKDPWFQVGFMRPIAFSMKETALEDNIDFNGDEDGNEDGNGSNNHRGELVGAQPARPSYNAFEIISSLSHGFDLRNLFETRKRSPSMFISKHSASTVMAKLEAVAKKLNFRVTGKKEFTVRMQGATEGRKGKLGMTMEVFEVAPEVAVVEFSKSAGDTLEYIKLCEEEVRPSLKDIVWSWQGDCNSHQ 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g02043 459 Gene3D Kinase associated domain 1, KA1 326 450 - -
Phco10g02043 459 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 445 - -
Phco10g02043 459 FunFam Non-specific serine/threonine protein kinase 14 102 - -
Phco10g02043 459 MobiDBLite consensus disorder prediction 298 323 - -
Phco10g02043 459 FunFam Non-specific serine/threonine protein kinase 326 449 - -
Phco10g02043 459 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g02043 459 ProSiteProfiles NAF domain profile. 325 350 IPR018451 GO:0007165
Phco10g02043 459 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g02043 459 CDD CIPK_C 331 445 - -
Phco10g02043 459 FunFam Non-specific serine/threonine protein kinase 16 317 - -
Phco10g02043 459 Gene3D Transferase(Phosphotransferase) domain 1 14 323 - -
Phco10g02043 459 Pfam NAF domain 329 384 IPR004041 GO:0007165
Phco10g02043 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Phco10g02043 459 ProSitePatterns Protein kinases ATP-binding region signature. 29 56 IPR017441 GO:0005524
Phco10g02043 459 SUPERFAMILY Protein kinase-like (PK-like) 19 278 IPR011009 -
Phco10g02043 459 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g02043 Phco-Chr10 42064499 42065878 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco10g02043 Pkinase 3.9e-76 CL0016