Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g02036 ATGGAGGAAAACCGCTGGGTGAAGTGCTCTTCGCATATGGAAATGGAGGATGAGGTGTTGAATGAATGTTTGTGCCAGACGAACCCCTTTGATGAAGAGTTTCTTAGAGATATTCTGCAGCAGCCGGAGGCAGAAGAGGGGTGTGTTAACGGCGGTCCAGATGGTGGTGGTGATAACTTCATGATGATGAAGAACAGTAACTCCTCCATCATCAATCTTTGTGGTGAAGACAAGAACAAATCCGCTTATATACTGTCTTTTGACAAATCCGGTGATGATTCTTTGTCTGGTTGGAAAGATGTCTCCCCAAACTTGCCTTTGTCCTCATCAAGGAGCAACCAAGGAACCAAGAAGACTCGAACCGCTTCTGAATCAATGGATCACATCATGTCAGAGAGAAAAAGGAGACAGGAGCTCACCAGGAAGTTCATAGCACTTGCTTCCACTATCCCTGGCTTGAAGAAGATGGACAAGGCACATGTACTAAGAGAAGCAATCAATTACGTGAAGCAACTGCAAGAACGTGTAGAAGTGCTAGAAGAAGATATCCAGAAGAACGGTGCAGAATCAGCTATCACCATAACAAGATCTCATCTCTGCATTGATGACACAAACAATGATGAATTCTATGGGTCCAATGAAGCAGTTCCTCCTGAAGTTGAAGCCAGAGTCCTAGGGAAGCAAGTGTTGATCAAAATTCATTGTGGCAAACAAAAGGGAATTCTGCTTAAAATAATGTCTCAGCTTGAACATCTTCATCTCTACATATCCACTAGCAATGTCTTGCCACTTGGAAATACCATTGACATCACTATCATTGCTCAGATGGGTGATAAATACAACATGGTAGTGAAGGATCTAGTGAAAGAACTGAGACGAGTGGCTATGATGAAGTTGTGTGTGTCACAATGA 912 0.4309 MEENRWVKCSSHMEMEDEVLNECLCQTNPFDEEFLRDILQQPEAEEGCVNGGPDGGGDNFMMMKNSNSSIINLCGEDKNKSAYILSFDKSGDDSLSGWKDVSPNLPLSSSRSNQGTKKTRTASESMDHIMSERKRRQELTRKFIALASTIPGLKKMDKAHVLREAINYVKQLQERVEVLEEDIQKNGAESAITITRSHLCIDDTNNDEFYGSNEAVPPEVEARVLGKQVLIKIHCGKQKGILLKIMSQLEHLHLYISTSNVLPLGNTIDITIIAQMGDKYNMVVKDLVKELRRVAMMKLCVSQ 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g02036 303 MobiDBLite consensus disorder prediction 103 128 - -
Phco10g02036 303 Gene3D - 113 188 IPR036638 GO:0046983
Phco10g02036 303 PANTHER BHLH TRANSCRIPTION FACTOR 70 296 - -
Phco10g02036 303 Coils Coil 162 189 - -
Phco10g02036 303 SMART finulus 129 178 IPR011598 GO:0046983
Phco10g02036 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 191 IPR036638 GO:0046983
Phco10g02036 303 Pfam Helix-loop-helix DNA-binding domain 128 173 IPR011598 GO:0046983
Phco10g02036 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Phco10g02036 303 MobiDBLite consensus disorder prediction 103 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g02036 Phco-Chr10 42026082 42029313 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco10g02036 HLH 2.2e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g02036 10 42026082 42029313 Phco1g00093 1 672317 673884 PCT
Phco1g00094 1 680160 681943 Phco10g02036 10 42026082 42029313 PCT