Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g02032 ATGAATCTTCTTGTTCTCTTCCTACCTGTTTGGGTGCTAAGCATTTCTCTTTCCTCGCCAATTCTTCATGCTGCATCCTCCATTTCTGTTTCTCAAAATGCACAAGCTGAATCTCCAGGTATTCAGGAGGTCAGAGCAGTGCACCACCAGAATTTGGATAAGAGAATTCTAATTGGGTTAGTTGCTTGTTTTGGTCTTCTTGGTGGAGTCTTCCTAATCATACTATATGTCTGGTTCCGTCGACATAAAACCTTAAAACACTCCAGAAGTAAAAGCCAAGAAACCACTGAGGCTGCAAAAGGGGAAACCTTAGGCTCGGTTAATGCTAAACTTAACTACTCTAGGATGGCAGATAAGAAGAGTTCAGTTGCTATTTTTGAGTATCAGCTGTTAGAGGCTGCCACGAACAGCTTTAGCACAAGCAGTATTATGAGAGAGAGTGGTTCAAGAATCATTTACAGAGCTAATTTTGATGAGCATTTCCAGGCAGCTGTGAAGAAAGCAGATAGTGATGCTGATAAAGAATTTGAGAATGAAGTGAGTTGGTTGAGCAAGATGCGCCATCAGAATATCATAAAACTTATGGGTTACTGTATTCATGATCAATCGAGGTTTCTTGTTTATGAATTGATGGAGAATGGGTCTCTGGAGACTCAATTGCATGGGCCTAATCGAGGGTCATCTTTAACCTGGTATCTCAGGTTAAGAATTGCTGTTGATGTTGCCAGAGCATTAGAATATCTCCATGAGCACTCCAATCCTCCTGTGGTTCATCGAGACTTAAAATCTTCCAATGTTCTTCTGGATTCTAACTTTAATGCGAAGTTATCAGATTTTGGATTTGCTATGGTTTCTGGAATGCAACATAAGAACATGAAGATGTCAGGAACTTTAGGATACGTGGCCCCTGAGTACATATCACATGGTAAACTAACTGACAAGAGCGATGTCTACGCTTTTGGGGTTGTTCTTCTAGAACTCCTAACCGGAAGAAAACCCATGGAGAACATGACCTCACACCAATATCAATCCCTTGTATCATGGGCCATGCCTCAGCTAACTGACAGATCGAAGCTTCCAAGTATTCTTGATCCTGTTATCAGAGACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTACTCTGCGTGCAAGCAGAACCAAGTTATAGGCCATTAATAACAGACGTGTTGCACTCTCTCATCCCTTTGGTACCTGTTGAGCTTGGAGGGTCACTAAGAGTTACGGAACCAATCAGCTCAGAGAACTCTCATTGA 1287 0.418 MNLLVLFLPVWVLSISLSSPILHAASSISVSQNAQAESPGIQEVRAVHHQNLDKRILIGLVACFGLLGGVFLIILYVWFRRHKTLKHSRSKSQETTEAAKGETLGSVNAKLNYSRMADKKSSVAIFEYQLLEAATNSFSTSSIMRESGSRIIYRANFDEHFQAAVKKADSDADKEFENEVSWLSKMRHQNIIKLMGYCIHDQSRFLVYELMENGSLETQLHGPNRGSSLTWYLRLRIAVDVARALEYLHEHSNPPVVHRDLKSSNVLLDSNFNAKLSDFGFAMVSGMQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKPMENMTSHQYQSLVSWAMPQLTDRSKLPSILDPVIRDTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPVELGGSLRVTEPISSENSH 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g02032 428 Gene3D Phosphorylase Kinase; domain 1 99 210 - -
Phco10g02032 428 Pfam Protein kinase domain 164 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g02032 428 ProSiteProfiles Protein kinase domain profile. 138 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g02032 428 SMART serkin_6 128 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g02032 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Phco10g02032 428 FunFam probable receptor-like protein kinase At1g80640 211 409 - -
Phco10g02032 428 Gene3D Transferase(Phosphotransferase) domain 1 211 409 - -
Phco10g02032 428 PANTHER OS01G0750732 PROTEIN 32 408 - -
Phco10g02032 428 SUPERFAMILY Protein kinase-like (PK-like) 114 404 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g02032 Phco-Chr10 41983349 41986428 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Phco10g02032 Pkinase 4.4e-44 CL0016