Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01929 ATGGATGGCATTGAGGATGATGCGAGCTATCACCCTAACCCATATCGCATCATCAGTCGCCAACGAGGTTATGGTTATGGTTATGGTTATCAGAATTCTCCATATTCCCTCCCGGTTAATACTGAGTATGCCCATCATCATGATGACGATGAAGAACAAGAGCAGTTAGAAGGAGATGATGAGGTTGATCAAAGTAACAGCCTGCAGCTTGGCCAAAAGGATGGGGATGAAGAAAATGGCATGGATGGGGGTGGTGATGAAAATGGTGATGGGGAAGAGGAGGTAGAGGACAATAAACAGATTAGTTATTATGCCACTAAGACTGAAGATGATTTGGAGTGGCACCCAAAGAAGCAAAAGCTGAAGAGTTTGATTTCAACCTATGAACTTGCTCCTCGTGTGCCAGCGCCATCAGCTGCAGCACCTCCAGTTCCTTCAGCTCCCAAACCATCTTCTGGGGGTAGGAATTCACTTACTGACTGGACTGAGCTTGAGACATTTGTTCTTCTTGATGCATGGGGTTATAGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATGTGAGGAGTGGCAGCAAGTATCGAAAATGGTAGCACAAGTTTCAAAAATTGAAAGGACGGATACTCAGTGTCGAAACCGCCTTGACACACTGAAGAAAAAATACAAGAAGGAGAAGGCTAAATTTCCAGATAGTGATGGTGGAGATTGCAAATGGGTTTATTTTAAAAAGATGGATGAGCTAATGAATTCTCCTCCACAACAAGTTGGTGTCTCTTGTGGTTTGGACTCAGGAGAGTATGTTTTTACGAACCCCGGAGTTTATTTGAATCATGCTAATGGATTGGATGAAATAAGGGATAGTCCTGAGAATGTGGAATCTACCGGTGAAGAAGGTTCGGATGGACTTCAAGCAAAGAAAAGGAAAGGAAGGAGCAGTGGTGGAGCTTCTTCCTTCAGGTTACTTGCCGATTCCATTCAAAAATTCAGTAAGATATATGAAAAGATAGAAAATAGTAAAAGGCAGCAGATGATGGAACTGGAAAAGATGAGAATGGATTTCCATAAGGATTTGGAAACACAGAAGAGGCAGATGTTTGGGAATTTGCAGTTTGAGATTTCAAAACTAGAACAGATAAATGATGAGAACGATGATTCTGCTGAGAATGGTATGTGA 1173 0.4228 MDGIEDDASYHPNPYRIISRQRGYGYGYGYQNSPYSLPVNTEYAHHHDDDEEQEQLEGDDEVDQSNSLQLGQKDGDEENGMDGGGDENGDGEEEVEDNKQISYYATKTEDDLEWHPKKQKLKSLISTYELAPRVPAPSAAAPPVPSAPKPSSGGRNSLTDWTELETFVLLDAWGYRFLQHGRKSLRCEEWQQVSKMVAQVSKIERTDTQCRNRLDTLKKKYKKEKAKFPDSDGGDCKWVYFKKMDELMNSPPQQVGVSCGLDSGEYVFTNPGVYLNHANGLDEIRDSPENVESTGEEGSDGLQAKKRKGRSSGGASSFRLLADSIQKFSKIYEKIENSKRQQMMELEKMRMDFHKDLETQKRQMFGNLQFEISKLEQINDENDDSAENGM 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01929 390 MobiDBLite consensus disorder prediction 27 101 - -
Phco10g01929 390 Coils Coil 332 352 - -
Phco10g01929 390 MobiDBLite consensus disorder prediction 284 315 - -
Phco10g01929 390 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 143 377 IPR044823 -
Phco10g01929 390 Gene3D - 161 223 - -
Phco10g01929 390 MobiDBLite consensus disorder prediction 135 156 - -
Phco10g01929 390 Pfam Myb/SANT-like DNA-binding domain 160 247 IPR044822 -
Phco10g01929 390 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01929 Phco-Chr10 41271454 41272626 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco10g01929 Myb_DNA-bind_4 5.6e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01929 10 41271454 41272626 Phco10g01929 10 41271454 41272626 ECH