Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01925 ATGCCCAAGAAAATTCGAGATTACCTCTTCAAAATCAAAAGCCCTCGCCCTCAAATCCGGTTACCCTCTAAGAATTGGATTCTTTCTGGTTGCAAACATCCTAGGACACCTTCCTTTGCCGTGTACAGTGGTGGAAACGAACGTCGTCATCATCATCATGTTCATGTTCGTAACAACAACAACAACAACGATGCAGCCACCTTAGCAGACGTTGACCGTTTCCTCTTTGAGAATTTCAAGTCTCTATACCTCAAAGACGACGAAGAAACCTTAAACAGCAAAAGGGTCTTCGAAGGTGAAGACGAAAACCACGAAGTGGAAGAAACAACATCGCCACGTGATCTTCATGGGTCAACCCGGTTCTTCGTGAAGCCGGGGTTCTCTGGGTCACTGGTGGAGGACGCTTTCACAAACACCACCATGAACACAACAACCAGTGACGAGGTAGGATCGGTCTCAACTGTTTCAACCCTCTACGATGTTTCGTCTTGCAGTTCTGACGAGAAGGAGGGTGCGGATCACGCGCTTCCGGATGATAGCATCGCTCTCTTGACGCACTCCACCATGCCTTACGAGGATTTCAGACGTTCCATGCAAGAAATGGTGAACAACCATGAAGGGGTGGTTGATTGGGATTTCATGGAGGAGCTCTTGTTTTGTTACCTTAATCTCAACCACAAAAAATCGCACAAGTTCATCCTCGGTGCTTTCGTGGATCTCATCACCGCCATGCGTCGGAGTAATTCCGAACCAGCTTCCGACAAGCCACGTAGCGTTCGAACCGTTAGGACTGTGACCAAAAACGTAACGTTAGGATTTGGGTCCTCCTAG 831 0.4801 MPKKIRDYLFKIKSPRPQIRLPSKNWILSGCKHPRTPSFAVYSGGNERRHHHHVHVRNNNNNNDAATLADVDRFLFENFKSLYLKDDEETLNSKRVFEGEDENHEVEETTSPRDLHGSTRFFVKPGFSGSLVEDAFTNTTMNTTTSDEVGSVSTVSTLYDVSSCSSDEKEGADHALPDDSIALLTHSTMPYEDFRRSMQEMVNNHEGVVDWDFMEELLFCYLNLNHKKSHKFILGAFVDLITAMRRSNSEPASDKPRSVRTVRTVTKNVTLGFGSS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01925 276 ProSiteProfiles OVATE domain profile. 183 243 IPR006458 -
Phco10g01925 276 NCBIfam uncharacterized plant-specific domain TIGR01568 181 244 IPR006458 -
Phco10g01925 276 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 82 244 IPR038933 GO:0045892
Phco10g01925 276 Pfam Transcriptional repressor, ovate 188 244 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01925 Phco-Chr10 41241170 41242000 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco10g01925 Ovate 9.8e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01925 10 41241170 41242000 Phco10g01925 10 41241170 41242000 ECH
Phco10g01925 10 41241170 41242000 Phco1g00181 1 1294666 1295637 PCT